Serratia sp. SCBI: SERRSCBI_05530
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Entry
SERRSCBI_05530 CDS
T03314
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03030
DNA replication
sers03430
Mismatch repair
sers03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SERRSCBI_05530 (holA)
03430 Mismatch repair
SERRSCBI_05530 (holA)
03440 Homologous recombination
SERRSCBI_05530 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sers03032
]
SERRSCBI_05530 (holA)
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_05530 (holA)
Enzymes [BR:
sers01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SERRSCBI_05530 (holA)
DNA replication proteins [BR:
sers03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SERRSCBI_05530 (holA)
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SERRSCBI_05530 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AIM20728
LinkDB
All DBs
Position
complement(1222901..1223935)
Genome browser
AA seq
344 aa
AA seq
DB search
MIRIYPEQLAAQLREGLRACYLLSGNEPLLLQESQDLLRQAAQQQQFSEHYSISLDAHTD
WDAIFGICQAMSLFASRQTLLLIFPENGPTAPIGEQLTKLATLLHDDILLILRGPRLTKA
QENSAWFKALSPHGALVSCQTPEQAQLPRWVAARAKAMKLELDDAANQLLCYCYEGNLLA
LSQALERLSLLHPDGKLTLPRVEQAVNDAAHFTPFHWLDALLAGKSKRAWHILQQLQQED
VEPVILLRTLQRELLLLLTLQRRMASAPLRTLFDQHKVWQNRRPLVTQALQRLSGAQLQQ
AVQLLTQIELTLKQDYGQSVWPELETLSMLLCGKPLATSFTDAH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcatttatccggaacaacttgccgcgcagctccgagaggggctgcgcgcttgt
tatttattgagcggcaatgaaccgctgctgctgcaggaaagccaggatctgctccggcag
gccgcgcaacagcagcagttcagcgagcactacagcatttccctcgacgcccataccgac
tgggacgccatcttcggcatctgccaggcgatgagcctgttcgccagccgccagacgctg
ctgctgattttcccggaaaacggcccgacggcgccgatcggcgaacagctgaccaagctc
gccaccctgctgcacgacgacatcctgctgatcctgcgcggcccgcgcctcaccaaagcg
caggaaaacagcgcctggttcaaggcgctcagcccgcacggcgccctcgtcagttgccag
acgccggagcaggcacagctgccgcgctgggtcgccgcgcgcgccaaggcgatgaagctg
gagttggacgacgcggccaatcagctgttgtgctactgctacgaaggcaacctgctggcg
ctgtcgcaggcgctggagcggctgtcgctgctgcacccggacggcaagctcaccctgccg
cgcgtcgagcaggcggtgaacgacgccgcccacttcacgccgttccactggctggacgcc
ttgctggccggcaagagcaagcgcgcctggcatattttacagcagctgcagcaagaggat
gtcgagccggtgatcctgttgcgcaccctgcagcgcgaactgctgctgttgctgacgctg
cagcgccgcatggcgtccgcgccgctgcgcacgctgttcgatcagcacaaggtctggcag
aaccgccgcccgctggtcactcaggcgctgcaacgcctgtccggcgcccagctgcagcaa
gcggtacagctgctgacgcaaatcgagctgaccctcaagcaggactatggccagtcggtc
tggccggaactggaaaccctgtcgatgctgctgtgcggcaaacccctggccacgagtttt
accgatgcccactaa
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