Serratia sp. SCBI: SERRSCBI_06480
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Entry
SERRSCBI_06480 CDS
T03314
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sers
Serratia sp. SCBI
Pathway
sers00300
Lysine biosynthesis
sers00470
D-Amino acid metabolism
sers01100
Metabolic pathways
sers01110
Biosynthesis of secondary metabolites
sers01120
Microbial metabolism in diverse environments
sers01230
Biosynthesis of amino acids
Module
sers_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SERRSCBI_06480
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SERRSCBI_06480
Enzymes [BR:
sers01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
SERRSCBI_06480
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AIM20918
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All DBs
Position
complement(1424711..1425586)
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AA seq
291 aa
AA seq
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MTPLLFHKYHGLGNDYLVCHRSVADRLSLEQIRLLCHPHYGIGSDGLLIDSGDAVNPTLR
IINPDGSEAEKSGNGLRIYARYLFDSKRVAHQPFLVHTAGGDVRCQVAEDAHQITVEMGR
ANFSPAALPALIDLPEALNYPLPLKEETLSVSLVSMGNPHCVVPVEKLDLAQVHRLGPQI
ERHPLFPKRTNVQLVEVVDRQTLRIGIWERGAGFTLASGSSSCAAASVMRKLGRVGDRVS
VRMPGGELQIAFSGDFQVSMRGPVHKIATLTLDEDCFAGGAGLFTGSTPAA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgactcccctgctgtttcacaaatatcacggtctgggcaacgactacctggtatgccat
cgttcggtcgccgatcgcctgagcctggaacaaatccgcctgctgtgccacccgcattac
ggcatcggttccgacggcctgctgatcgacagcggcgacgccgtcaatcccaccctgcgc
atcatcaacccggacggctccgaagcggagaaaagcggcaacggcttgcgtatctacgcg
cggtatctgttcgacagcaagcgcgtggcgcatcagccgtttctggtgcacaccgccggc
ggcgacgtgcgttgccaggtggcggaagacgcgcatcagataaccgtggagatggggcgc
gccaatttcagcccggcggcgctgccggccttgatcgatctgccggaggcgctgaactat
ccgctgcccctgaaggaggagacgttaagcgtttcgctggtgtcgatgggcaacccgcac
tgcgtggtgccggtggaaaaactggatctggcgcaagtgcatcggctcggaccgcagatt
gagcgccatccgctgttcccgaaacgcaccaatgtacaactggtggaagtggtcgatcgc
cagacgctgcgcatcggcatctgggagcgcggcgccggctttaccctcgcctccggcagc
agcagctgcgccgccgccagcgtgatgcgcaagttgggacgagtcggcgatcgggttagt
gtgcggatgccgggcggcgaactgcagatcgccttcagcggcgattttcaggtcagcatg
cgcggacctgtgcataaaatcgccaccctgacgctggacgaagactgctttgccggcggc
gcggggctgtttacgggatccaccccagcagcctga
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