KEGG   Serratia sp. SCBI: SERRSCBI_08395
Entry
SERRSCBI_08395    CDS       T03314                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
sers  Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:sers00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sers03400]
    SERRSCBI_08395 (helD)
Enzymes [BR:sers01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SERRSCBI_08395 (helD)
DNA repair and recombination proteins [BR:sers03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SERRSCBI_08395 (helD)
SSDB
Motif
Pfam: Helicase_IV_N UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_12 DEAD
Other DBs
NCBI-ProteinID: AIM21295
LinkDB
Position
1838508..1840562
AA seq 684 aa
MELKATSLGKHLAQHPYNRVRLLHAGVEVSGEKHEYLIPFNQLIQVRCKRGIVWGELEFE
LPDEKVVRLHGTEWQETQRFYHFLQQAWQQWSAEMSDVSAGVLQQQVAQIKRIEQQDKWF
KKSELGKLQQQIREAFSALPMPVARLEEFDNCRADYHLCLQWLQQGERSIEQRNRQWTER
MLDQHHDFFQTVESSPLNDAQSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRQEAE
PGQILLLAFGRQAAGEMNDRIKERLGDVGIQAKTFHALALQIIQQGSRKAPAISRLETDA
KARKELLITHWRQQCAEKKAQAKGWRQWLTEELEWEVPEGDFWQDKRLADRLASRLERWL
GLMRMHGGSQAEMIEQADEEIRDLFSKRIRLMAPLLKAWKSALKEEGAVDFSGLIHQAVN
ILDKGRFVSPWKHILVDEFQDISPQRALLLAALRRQNKQTCLFAVGDDWQAIYRFSGAEL
TLTTAFATNFGEGAQCALDTTYRFNERIGEVANRFVQQNPHQLKKPLNSLSKGNKKSVTI
LPHEQLEPLLDKLSGYAKPDERILVLARYHHLKPEALAKAATRWPKLDLEFMTIHASKGQ
QAEYVIIAGLHEGRDGFPAVARESVLEEVLLPQPEDFPDAEERRLLYVALTRAKHQVWLL
QDRERPSVFVDHLRELGVPVQKKP
NT seq 2055 nt   +upstreamnt  +downstreamnt
atggaacttaaagcgacatcgctggggaaacacctggctcagcacccttataaccgcgtg
cggttgctgcacgccggcgttgaggtgagcggggaaaaacatgaatacctgatccccttc
aatcaactgattcaggtcaggtgcaagcgtggcatcgtctggggcgagctggaatttgaa
ttaccggacgaaaaagtggtgcggctgcacggcaccgaatggcaggaaacgcagcgtttt
tatcactttctgcagcaggcgtggcagcagtggagcgccgaaatgagcgacgtcagcgcc
ggcgtgttgcaacagcaggtggcgcagattaagcgcattgagcaacaagataaatggttc
aaaaagtctgagctgggcaagttgcagcagcaaattcgcgaggctttctccgcgctgccg
atgccggtggcgcgcctggaggaattcgataactgccgggctgattaccatctgtgttta
caatggttgcagcagggggagcgcagcatagagcaacgcaaccggcagtggaccgagcgc
atgctggatcaacaccatgatttcttccagaccgtcgagagttcgccgctcaacgacgcc
cagagccgggcagtggtcaatggcgaggattccgtgctggtgttggccggcgccggcagc
ggcaaaacgtcggtgctggtggcgcgcgccggctggctgctgcgtcgtcaggaggctgag
ccgggtcaaatcttgctgttggcgttcggccgtcaggccgccggcgagatgaacgaccgc
atcaaagaacgtttgggggatgtcggtattcaggccaagaccttccatgccttggcgctg
caaatcattcaacaaggcagccgcaaagcgccggccatcagccggttggaaaccgatgcc
aaagcgcgcaaagagctgctgatcacccattggcgccaacagtgcgcggagaagaaagcg
caggccaaggggtggcgccaatggttgaccgaagagctggaatgggaagtgccggaaggc
gacttctggcaggataagcgcctggcggatcgcctggcaagccggttggaacgctggttg
gggctgatgcgcatgcacggtggcagccaggcggaaatgatcgagcaggcggatgaagaa
atccgcgatctgttttcaaaacgtatcaggctgatggcgccgctgctgaaagcctggaaa
agcgccttgaaagaggaaggggcggtggacttctccggccttatccatcaggcggtcaac
attctcgacaaggggcgcttcgtcagcccgtggaaacatattctggtcgacgagtttcag
gatatctcaccgcagcgtgcactgttgctggcggcattgcgccgacagaacaagcagacc
tgcctgtttgctgtaggggatgactggcaggcgatttatcgcttcagcggcgcagaactg
acgttaaccacggccttcgccacgaacttcggcgaaggcgcgcagtgcgcgctggatacc
acctatcgtttcaatgaacgcatcggcgaggtggccaaccggttcgtgcagcaaaacccg
caccagctgaaaaaaccgctcaatagcctgagcaagggcaataaaaagtcggtgacgatc
ctgccgcacgagcagttggagccgttactggacaagctgagcggctacgccaagccggat
gagcgcatcctggtgctggcgcgttaccaccatctgaaaccggaagcgctggcgaaagcg
gccacccgctggccaaagctggatctggagtttatgaccatccacgccagcaaggggcag
caggcggaatacgtcatcatcgccggtttgcatgaggggcgcgacggcttccccgccgtg
gcgcgcgagtcggtgttggaagaggtgttactgccgcagccggaggactttccggatgct
gaagagcgccgtctgctgtatgtcgcgttgactcgcgccaaacatcaggtatggctgttg
caggatcgtgaacgtccttcggtgttcgtcgaccacctgcgtgagcttggcgttccggtg
cagaaaaaaccataa

DBGET integrated database retrieval system