Serratia sp. SCBI: SERRSCBI_11270
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Entry
SERRSCBI_11270 CDS
T03314
Name
(GenBank) Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sers03000
]
SERRSCBI_11270
Transcription factors [BR:
sers03000
]
Prokaryotic type
Helix-turn-helix
Other families
SERRSCBI_11270
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
GAF
AAA_2
Mg_chelatase
HTH_30
AAA_5
HTH_29
HTH_7
HTH_23
Xre-like-HTH
AAA
HTH_28
HTH_1
HTH_22
HTH_psq
HTH_50
Motif
Other DBs
NCBI-ProteinID:
AIM21862
LinkDB
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Position
2415832..2417607
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AA seq
591 aa
AA seq
DB search
MLPDDRLLTESASLLTHPLAESWQRSRSYGLTRADQHIPFIKAGLLEELRSRNDWVPQRV
QPLIEQLGAQITRQPAIVVIADADGLVLETRGNHDFLHKASRFALAPGNQWGEAERGTNA
IGTALALGAFCEVRGDQHFLNQNAGLNCTAAPIYRPDGHIAGILDLSAPAQRPYPDAQRL
IMQAVRHIEHRWVRSAIADRHWTLRLHADAGRLGCAQELLLVFHNEVLIAANRLAMVEFQ
LSPAAFGSLEFAQLFPDLLRQPSGAPRQTLAGNQRHYYSLLEAPQRRVSALRSTPPAERH
DEQHQKALRILNAGLSLCVTGETGCGKEHFSRRLFQESRWRNGNFVAINCAALPEPLIES
ELFGYAPGAFTGANPKGYIGKIREADGGVLFLDEIGDMPAGLQTRLLRVLQEKTVTPLGS
RSAYAVDFALVCATHHDLHRQVQTGAFREDLLYRIQEYSLRIPPLRERAQLEAFILQLWR
ELGGERRDIRLLPEALAMLARYPWPGNVRQLLSTLKVLLALADDRAVLTLDDLPQSIAVL
SPRQACADAGGEDLQAAIDRAGGNLSRAAKALGVSRSTLYRKLGRRKAAEE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctgacgatcgcttgctcactgagagcgccagtttgctgacccacccgctggcg
gaatcctggcagcgcagccgcagttacggcctgacgcgcgccgatcaacatatcccgttt
atcaaagccggtctgctcgaagaactgcgcagccgcaacgactgggtgccgcaacgggta
cagccgctgatcgaacagttgggcgcgcaaattacgcgtcaaccggccatcgtggtgatc
gccgacgccgacgggctggtgttggaaacccgtggcaatcacgattttctgcacaaggcg
tcgcgctttgcgctggcgccgggcaaccagtggggagaagcggagcggggcaccaacgcc
atcggcactgcgctggcgctgggcgctttctgcgaagtgcgcggcgatcagcattttctc
aaccaaaacgccggattgaactgcaccgccgcgccgatctaccggccggatggccatatt
gccggcatactggatctctctgccccggcccagcgcccgtatcctgatgctcagcgcctg
atcatgcaggcggtgcgccatatcgaacaccgctgggtcagaagcgcgatcgccgatcgt
cactggacgctgcgcctgcacgccgacgctggccgcctgggctgcgcgcaggaactgctg
ctggtgtttcacaacgaagtgctgatcgccgccaatcggctggcgatggtcgagttccaa
ctctcgccggccgcattcggctcgcttgaattcgctcagctgttccccgatctgttgcgg
caaccctccggcgcgccacgccagacgctggccggcaatcaacggcactattattcgctg
ctcgaggcgccccagcgtcgcgttagcgctctgcgttcgacgccgccggcggaacggcac
gacgagcagcaccagaaagcgttgcgtattctcaacgccggcctttctctgtgcgtgacc
ggcgaaaccggctgcggcaaggagcacttcagccgccgcctgtttcaggaaagtcgctgg
cgcaacggcaacttcgtggcgatcaactgcgcggcgttgccggaaccgctgatcgagtcc
gaactgttcggctatgcgccgggggcgtttaccggcgccaaccccaaaggctatatcggc
aagatccgtgaggcggatggcggcgtgctgttcctcgatgaaatcggcgacatgccggcg
ggcctgcaaacgcgcctgctgcgggtgttgcaggagaaaacggtcacgccgctcggcagc
cgcagcgcctatgcggtcgatttcgcgctggtttgcgcgacgcaccacgatctgcatcgg
caggtgcaaacgggggcgtttcgcgaagatttattgtatcgcatacaggaatacagcctg
cgcatcccgccgctcagagagcgggcgcaattggaggcgttcattctgcagctgtggcgg
gagctgggcggcgaacggcgcgacattcgcctgttgccggaggcgctggcgatgctggcg
cgctatccgtggcccggcaacgtgcggcaattgttaagtacgctcaaggtgctgctggcg
ctggcggacgatcgcgcggtgctcaccctggacgatctgccgcagtcgatcgcggtgctg
tcgccgcgccaggcatgcgccgacgccggcggcgaggatctgcaggcggcgatcgacagg
gctggcggcaatctcagccgggcggcgaaggcgctcggcgtttcgcgcagcacgctgtac
cgcaagctggggaggcgaaaagcggcagaggaatga
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