Serratia sp. SCBI: SERRSCBI_13135
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Entry
SERRSCBI_13135 CDS
T03314
Symbol
ruvC
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SERRSCBI_13135 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_13135 (ruvC)
Enzymes [BR:
sers01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SERRSCBI_13135 (ruvC)
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SERRSCBI_13135 (ruvC)
RecFOR pathway proteins
SERRSCBI_13135 (ruvC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF3882
NeuB
Arm-DNA-bind_1
Motif
Other DBs
NCBI-ProteinID:
AIM22227
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All DBs
Position
complement(2824765..2825286)
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AA seq
173 aa
AA seq
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MAIILGIDPGSRVTGYGLIRQQGRQLSYIASGCIRTVVDDMPTRLKLIYAGVSEIITQFQ
PDFFAIEQVFMAKNPDSALKLGQARGVAIVAAVNQNLEVFEYAARQVKQTVVGTGAAEKA
QVQHMVRSLLKLSANPQADAADALAIAITHCHLSQNVLRMSEGRLNLARGRLR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcatactcggtatcgatcccggctcacgcgtcaccggctatggccttatccgc
cagcaggggcgccagttgagctatatcgccagcggctgcatccgcacggtggtggacgac
atgccgacgcggctgaagctgatttacgccggcgtcagcgagatcatcacccagtttcag
cccgacttcttcgccatcgaacaggtgtttatggccaagaacccggattcggcgctcaag
ctcggccaggcgcgcggcgtcgcgatcgtcgcggcggtgaatcagaatctggaagtgttc
gagtatgcggcgcggcaggtcaaacaaaccgtggtcggcaccggcgcagccgaaaaggcg
caggtgcagcacatggtgcgctcgctgctcaaactctcggccaacccgcaggcggacgcc
gccgacgccctggctatcgccatcacccactgccacctcagccagaacgtgctgcggatg
agcgaagggcggcttaacctggcgcgcgggcgtttgcgctga
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