Serratia sp. SCBI: SERRSCBI_13280
Help
Entry
SERRSCBI_13280 CDS
T03314
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sers03009
]
SERRSCBI_13280
Enzymes [BR:
sers01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
SERRSCBI_13280
Ribosome biogenesis [BR:
sers03009
]
Prokaryotic type
rRNA helicases
SERRSCBI_13280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Ebola-like_HR1-HR2
Motif
Other DBs
NCBI-ProteinID:
AIM22256
LinkDB
All DBs
Position
complement(2850618..2852000)
Genome browser
AA seq
460 aa
AA seq
DB search
MSTVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILQGRDVRAKAKTGSGKTAAFGI
GLLNSIVVGQVATQALVLCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSL
VHAPHIVVGTPGRIQEHLRKKTLQLDELKVLVLDEADRMLDMGFADDIDDVISYTPPQRQ
TLLFSATYPAGIERISARVQRQPLSVEVDDGEAQTSIEQRFYETTRDQRPALLVSAIRYH
QPASCVVFCNTKRDCQTVLEALEARGISALALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKELELVVNYELAFDPEVHVHRIGRTGRAGMSGLAISLCTPQEMARAHAIEDY
LQMSVDWSPVSELSGAANGSLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPVHAYVAIRKASARKALQQLQQGKIKGKSCKVRLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagtttctttttcttccctgccgctgccagccgaacagttggccaacctcaac
gaactggggtacgccgaaatgacgccggtacaggccgccgcattgcccgccatcctgcaa
gggcgggacgtgcgcgccaaggcgaaaaccggcagcggtaaaacggcggccttcggcatt
ggtctgctgaacagtatcgtcgtcggtcaggtcgccacgcaggcgctggtgctctgtccc
acccgcgagctggccgatcaggtgagcaaagagctgcgtcgcctggcgcgttttacgcaa
aacatcaagatcctgacgctgtgcggcggccagccgatggggccgcagctcgattcgctg
gtgcatgcgccgcacatcgtggtggggacgccgggccgtatccaggaacacttgcgcaag
aaaacgctgcagctggacgagctgaaggtgctggtgctggatgaggccgatcgcatgctg
gacatggggttcgccgacgacatcgacgatgtgatcagctatacgccgccgcaacgtcag
acgctgctgttttccgccacgtacccggcaggcatcgagcgcatcagcgcgcgcgttcaa
cgccagccgctgagcgtcgaggtggacgatggcgaagcgcagacctccatcgaacaacgc
ttttatgagaccacgcgcgatcagcgcccagcgctgctggtgtcggccattcgctatcat
caacccgcgtcctgcgtggtgttctgcaataccaagcgcgactgtcagacggtgcttgag
gccctggaggcccgcggcatcagtgcgctggcgctgcatggcgatctggaacagcgcgac
cgcgaccaggtgttggtgcgtttcgccaaccgcagttgccgggtattggtggcgaccgac
gtcgccgcacgcgggctggatattaaagagctggagctggtggtcaactacgagctggcg
ttcgatcccgaagtgcatgtgcaccgtattggccgtaccggccgcgccggcatgagcggg
ttggcgatcagcctgtgcacgccgcaggaaatggcgcgtgcgcacgcgattgaagactat
ctgcagatgagcgtcgactggtcgccggtgtccgagctgagcggggcggccaacggctcg
ctggaggcggaaatggtgacgctgtgtatcgacggtggccgcaaggcgaagatccgtccc
ggcgatattctcggggcgctgaccggtgatgccgggctgacggcggcggaagtgggcaag
atcgatatgttcccggtgcatgcctatgtcgcgatccgcaaagccagcgcgcgcaaggcg
ctgcaacagttgcagcagggcaaaatcaaaggcaaaagctgcaaggtgcggctgctgaaa
taa
DBGET
integrated database retrieval system
