Serratia sp. SCBI: SERRSCBI_15090
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Entry
SERRSCBI_15090 CDS
T03314
Name
(GenBank) outer membrane usher protein SfmD
KO
K07347
outer membrane usher protein
Organism
sers
Serratia sp. SCBI
Pathway
sers02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SERRSCBI_15090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sers02000
]
SERRSCBI_15090
02044 Secretion system [BR:
sers02044
]
SERRSCBI_15090
02035 Bacterial motility proteins [BR:
sers02035
]
SERRSCBI_15090
Transporters [BR:
sers02000
]
Other transporters
Pores ion channels [TC:
1
]
SERRSCBI_15090
Secretion system [BR:
sers02044
]
Chaperone-usher system
Type 1 pilus assembly protein
SERRSCBI_15090
Bacterial motility proteins [BR:
sers02035
]
Pilus system
Fimbrial proteins
SERRSCBI_15090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AIM22610
LinkDB
All DBs
Position
complement(3208476..3210962)
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AA seq
828 aa
AA seq
DB search
MANPAFSRDYFNPALLETGRSGQQHVDLSIFENGQQVPGTYRVDIWVNDMLLETREVSFA
LRAGSDEKADLQPCLTREDLKRLGVKVELFPGLAGADRCANLAAIPQASAQFQFNRQRLM
LSIPQAALENKVRGYVPPEQWDEGLPAMLLNYGFTGSNSKGRDRFTQSASSYYLNLRPGF
NLGAWRVRNYTTWSYNSAGGGRASEDRWDSVYTYAQRNIIRLKSLLTLGESSSPSDVFDS
VSFRGAQLASDDDMLPESLRGYAPVVRGIARSNAQVVIRQNGYVIYQSYVAPGAFEISDM
YPTGGSGDLEVTIKEADGSEQHLTVPFASLPVLQREGRLKYALTSGQYRTYDHSVDKKIF
SQASLIYGLPAGFTLYGGGQFAGPYQSLALGLGKNLGEFGALSADVTQAWAKQEHQPKSD
GQSWRVRYSKNIVETGTNFAIAGYRYSTSGYYGLQEVLDTYRSGNRYAPIDRRKNRGEIT
LNQNLWEGAGSLSLSAVSEDYWGSERNMQSLSAGYNNSWNGISYGFNYSYSRNSQAIYGD
SNRGRIYDRDQIFAFNISVPLEKWLSNTYATYNLNTSKKGNTSHTAGLNGTALAGGNLSW
SVQEGYGSQGQGNSGNANADWRATYGELTAGYAYDRSQQRVNYGVKGGVIAHEDGVTFGQ
PFGETVALVQAAGASDVAVGNQVGVKTDWRGYAIVPYATPYRNNSIRLDVDSLPDDVDLE
LTNQSVTPTRGAVSRANFKANVGRRILMKVTDSQGAPLPLGASLRLAEGAAQPFLVGGDG
VVYLSGMAEKGLLIAQWGRNGENQCRIRYQLPAEPPSAGLQTLNGVCQ
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcccgccttctctcgtgactattttaatccggcgttgctggaaaccgggcgc
tcaggtcagcagcacgtcgatctgtcgatttttgaaaatggccagcaggttcccggcacg
tatcgggtcgatatttgggtgaacgacatgctgctggaaacgcgcgaggtgtcgttcgct
ctgcgggccggcagcgacgagaaggccgatctgcagccttgtctgacgcgggaagatctg
aaacggcttggggtgaaagttgagctgtttcccggtttggccggtgccgatcgctgcgcg
aatttggccgcgatcccgcaggcctcggcgcaatttcaatttaaccgccaacgcctgatg
ctgagtatcccccaggcggcgttggaaaataaggtgcgcggatacgttccgccggaacaa
tgggatgaaggcctgccggcgatgctgctgaactatggcttcaccggcagcaacagcaag
gggcgcgatcgattcacccagagcgcaagcagttattacctcaacctgcggccgggcttc
aacctgggtgcctggcgagtgcggaactacaccacctggagctacaacagcgccggcggc
gggcgagcgtcggaggatcgttgggactccgtctatacctacgcccagcgcaatatcatc
cgcctgaaaagcttgctgacgctcggcgaaagcagcagcccgtccgatgtgtttgacagc
gtatcgtttcgcggcgcgcagctggcttccgatgacgacatgttgccggaaagcctgcga
ggttatgcgccggtggtgcgcggcatcgcgcgcagcaatgcgcaagtggtcattcgccaa
aacggctatgtcatctaccagagttatgttgcgccgggcgcgtttgaaatttcggacatg
tacccgaccggcggcagcggcgatttggaggtgactatcaaggaggcggacggcagcgaa
cagcacctgaccgttcccttcgccagcctgccggtgctgcaacgcgaagggcggctgaaa
tatgcgctgacctcggggcaataccgcacttacgatcacagcgtggataaaaagatcttc
tcgcaggccagcctgatttatggcttgcccgccggtttcaccctgtatggcggcggccaa
ttcgccgggccgtatcaatcgctggcattgggtctgggcaagaacctgggcgagttcggc
gctctgtcggccgacgtcacccaggcgtgggcaaagcaggagcatcaaccgaaaagcgat
ggtcagtcatggcgcgtgcggtacagcaaaaatatcgtcgagacggggacgaacttcgcc
atcgccggctaccgctattcgaccagcggctactatgggctgcaggaagtgctggacacc
tatcgcagcggcaaccgttacgccccgatagaccgccgcaaaaatcgcggcgaaatcacg
ctgaaccagaatttatgggaaggggcggggtcgctttcactcagcgcggtctccgaagac
tattggggctccgagcgcaatatgcagtcgctgagcgcgggttacaacaatagctggaat
ggcatcagctacggttttaactacagctacagccggaattcacaggctatttacggcgat
tcgaaccgcgggcgcatttacgatcgcgatcagatcttcgctttcaacatcagcgtgcca
ttagagaaatggctgagcaacacctacgccacctacaacctcaacaccagcaaaaaaggc
aataccagccatacggcgggcctcaacggcacggcgctggccggcggcaacctcagctgg
agcgtacaggaagggtatggcagccagggtcagggcaacagcggcaacgccaacgccgac
tggcgcgcgacgtacggcgaactcacggcgggctacgcctacgatcgcagtcaacagcgc
gtcaactacggggtgaagggcggggtgatcgcccatgaagacggcgtgaccttcggtcaa
ccgttcggcgaaaccgtcgccctggtacaggcggccggcgcgagcgatgtggcggtcggc
aatcaggtcggggtgaaaaccgactggcgcggctacgcgatcgttccttacgccacgcct
tatcgcaacaattcgattcgcctcgatgtcgacagcttgccggatgatgtcgatctcgag
ttgacgaaccagtcggtcacgccgactcgcggcgcggtgagccgggcgaatttcaaagcc
aacgtcggcagacggattttgatgaaggtgacggactcgcagggggcacccctgccgctg
ggcgccagcctgcgtcttgccgagggggcggctcagccgttcctggtcggcggcgacggc
gtggtctatctgagcggcatggcggaaaagggcctgctcatcgcgcagtggggcaggaat
ggcgagaaccaatgccgcatccgttaccagttgccggcggagccgccgtcagcgggtctc
caaaccctaaacggcgtttgccaatag
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