Serratia sp. SCBI: SERRSCBI_16080
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Entry
SERRSCBI_16080 CDS
T03314
Name
(GenBank) NapC/NirT cytochrome c domain-containing protein
KO
K03532
trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
Organism
sers
Serratia sp. SCBI
Pathway
sers00680
Methane metabolism
sers01100
Metabolic pathways
sers01120
Microbial metabolism in diverse environments
sers02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
SERRSCBI_16080
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SERRSCBI_16080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sers02000
]
SERRSCBI_16080
Transporters [BR:
sers02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
SERRSCBI_16080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cytochrom_NNT
Mtrc-MtrF_II-IV_dom
Cytochrom_c3_2
Cytochrome_C7
Paired_CXXCH_1
Cytochrom_c_NrfB-like
Cytochrom_C552
PUA_2
Cytochrome_CBB3
SoxA-TsdA_cyt-c
Motif
Other DBs
NCBI-ProteinID:
AIM22794
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Position
3426070..3427230
Genome browser
AA seq
386 aa
AA seq
DB search
MSKKLTGFEKKRRWAWLWLLLLGIILGAALLAGTATVFHKTSDTAFCVSCHTMQQPLAEY
QGSVHFQNTKGIRAECADCHVPHQPIDYLWTKIRAVKDIYGEMVGTIDTPEKYEAHKLAM
AQSVWKTLKENDSATCRSCHSYDAMDITAQRPEARLQHPVAIKQGETCIDCHKGVAHILP
DMSGETQAGAAELAKAAALTAPGATTLYTIATEPFFLSADDSHNAGNLMPSTEVQVVKQD
GDKVLATVSGWQQDGVSEVFYAAQGKRILSVLLGEDARKQLKTASTQTDAETGLVWHQVS
LQVWLPRKQLIDDQQKIWRYAADMMSANCTGCHGLTALDRFNANQWIGVIKGMAPRTSLT
QEQLRVLTQYVQKHASDMPPAAPAKL
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaaactgactggctttgaaaaaaagcgccggtgggcatggctatggcttttg
ctgctggggattatcctcggcgcggcgctgttggccgggaccgccaccgtattccataaa
accagcgataccgccttctgcgtttcctgccacaccatgcaacaaccgctggccgaatat
cagggcagcgtccacttccaaaacaccaagggcatccgcgccgagtgcgccgactgccac
gtgccgcaccagccgatcgattacctgtggaccaagatccgcgcggtaaaagacatctac
ggcgagatggtcggcaccatcgatacgccggaaaaatatgaagcgcacaagctggcgatg
gcgcagtcggtctggaagacgctgaaagagaacgactcggccacctgccgctcctgccac
agctacgacgccatggacatcaccgcccagcgtcccgaagcgcgcctgcagcacccggtg
gcgatcaaacagggcgaaacctgcatcgactgccataaaggcgtggcccacatcctgccg
gacatgagcggcgaaacccaggccggcgccgccgagctggccaaggccgcggcgctgacc
gcaccgggcgccaccaccctctacaccatcgccaccgaaccgttcttcctcagcgcagac
gacagccataatgccggtaacctgatgccgtccaccgaagtgcaggtggtgaaacaggat
ggcgacaaggtgctggccaccgtgagcggctggcagcaagacggggtcagcgaagtgttc
tacgccgcgcagggcaaacgcatcctcagcgtgctgctgggtgaagacgcgcgcaaacag
ctgaagaccgcgtccacccagaccgatgcggaaaccggcctggtctggcatcaggtctct
ttgcaagtgtggctgccgcgcaagcagctgatcgacgatcagcaaaaaatctggcgctac
gccgcggacatgatgtcggccaactgcaccggctgccacgggctgaccgcgctcgatcgc
ttcaacgccaaccaatggatcggcgtcatcaaaggcatggcgccgcgtacctcactgacg
caggaacagctgcgcgtgctgacacaatacgtacaaaaacacgccagcgacatgccacct
gccgcaccggccaagctttaa
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