Serratia sp. SCBI: SERRSCBI_16375
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Entry
SERRSCBI_16375 CDS
T03314
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sers03032
]
SERRSCBI_16375
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_16375
Enzymes [BR:
sers01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SERRSCBI_16375
DNA replication proteins [BR:
sers03032
]
Prokaryotic type
DNA Topoisomerases
SERRSCBI_16375
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SERRSCBI_16375
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-ProteinID:
AIM22853
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Position
complement(3491529..3494171)
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AA seq
880 aa
AA seq
DB search
MSDLAREITPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLAEVVNGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YLRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYALTQLQVTFGINMVALHQGQPKLLNLKDILEAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV
SAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLNFIAELIFILESPERLMEVIREELVAVKELYNDGRRTEITANTSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGTNEVMLFSANGKVVRFPETQVRSMGRTATG
VRGINLGEGDSVISLIVPRGEGDILTVTQNGFGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETSDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSLEPGAEAVEEDTTPLDDGDDAAEPMDDDNV
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgagttgaaaaactcg
tatctggactacgcgatgtccgttattgtcggacgtgcgctgccagatgttcgtgatgga
ctgaagccggttcaccgccgcgttctttacgcgatgagtgtattgggtaacgactggaat
aaaccatacaagaaatcggcccgtgtcgtcggggacgtgatcggtaaatatcacccgcac
ggtgacagcgcggtttacgacactatcgtgcgtatggctcagccgttttcactgcgctac
atgctggtggacggtcagggtaacttcggttccgtcgacggcgactccgccgcggcgatg
cgttataccgaagtgcgcatgtccaagattgctcacgaacttttggcggatctggaaaaa
gaaaccgtcgacttcgtgcctaactatgatggcaccgagcagatcccggccgttatgccg
accaagatcccgaacctgctggtaaacggctcgtcgggcatcgccgtgggcatggccacc
aatattccgccgcacaacctggctgaagtcgtcaacggctgcctggcctatatcgatgat
gaaaacatcagcatcgaagggctgatggaacacatcccggggccggacttcccgacggcg
gcgatcatcaacggccgtcgcggcattgaagaggcctaccgcaccgggcgcggcaaagtc
tacctgcgcgcgcgcgcggaagtggaagccgacgccaaaaccggccgcgaaaccatcatc
gttcacgagatcccgtatcaggtgaacaaggcgcgtctgatcgaaaagatcgccgagctg
gtgaaagaaaaacgcgtagaaggcatcagcgcgctgcgtgacgagtccgataaagacggc
atgcgcatcgtgatcgaagtcaaacgcgacgcggtcggcgaagtggtgctgaacaacctg
tatgcgctgacgcaactgcaggttaccttcggcatcaacatggtcgcgctgcatcagggg
cagcctaagctgctgaacctgaaagatatcctcgaagccttcgtgcgccaccgccgcgaa
gtggtcacccgccgcaccatcttcgaactgcgcaaggcccgtgaccgcgcccatatcttg
gaagcgctggctatcgcgctcgccaacatcgacccgatcatcgagctgattcgccgtgcg
ccgacgccggcggaagcgaaagtcgcgctggtggctcagccgtgggatctgggcaacgtc
agcgccatgctggaacgcgccggtgacgacgccgctcgccctgagtggctggagccggag
ttcggcatccgcgacggcaagtactacctgaccgagcagcaggctcaggcgattctggat
ctgcgtctgcagaaactgaccggcctggagcacgaaaagctgctggacgaatataaagag
ctgctcaacttcatcgccgagctgatctttattctggaaagcccagagcgcctgatggaa
gtgatccgcgaagagctggtggcggtcaaagagctgtacaacgacggccgtcgcaccgag
atcaccgccaatacttccgacatcaacatcgaagacctgatcaaccaggaagatgttgtg
gtgaccctgtctcaccagggctacgtgaagtatcagccgctgtccgactatgaagctcag
cgccgcggcggcaaaggcaagtccgccgcgcgtattaaagaagaagactttatcgatcgc
ctgctggtggccaacacccacgatacgatcctgtgcttctccagccgtggccgcctgtac
tggatgaaggtgtatcaactgcctgaagccagccgtggcgcgcgcggccgcccaatcgtc
aacctgttgccgctggaagccgatgagcgtatcaccgccattctgccggtgcgcgagtat
gaagaagggcgtcacgtgttcatggccaccgccagcggtaccgtgaagaaaaccgcgctg
accgagttcagccgtccgcgcagcgccggcattatcgccgtcaacctcaacgagggcgac
gagctgatcggcgtcgatctgaccgatggcaccaacgaagtgatgctgttctccgccaac
ggtaaagtggtgcgcttcccggaaacgcaggtgcgttcgatgggccgtaccgcgaccggc
gtgcgcggtatcaacctcggcgaaggcgacagcgtgatttcgctgatcgtgccgcgcggc
gagggcgacattctgaccgtcacgcaaaacggcttcggtaaacgtactgcagtcaccgag
tacccgaccaagtcacgcgccacccagggggttatctccatcaaggtgagcgagcgtaat
ggccaggtggtcggcgccgtgcaggtggaaaccagcgaccagatcatgatgatcaccgat
gccggcacgctggtgcgtacccgcgtttcggaagtcagcgtggtcggtcgtaacacccag
ggcgtgacgctgatccgtacggcggaagacgaaaacgtcgtcggtctgcagcgcgtggcc
gagccggtggaagacgaagagctggacagcctggaaccgggcgcggaagcggtggaagaa
gacactacgccgctggacgatggcgacgacgcggctgagccgatggacgacgacaacgtt
taa
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