Serratia sp. SCBI: SERRSCBI_16920
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Entry
SERRSCBI_16920 CDS
T03314
Symbol
fadJ
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sers
Serratia sp. SCBI
Pathway
sers00071
Fatty acid degradation
sers00280
Valine, leucine and isoleucine degradation
sers00310
Lysine degradation
sers00362
Benzoate degradation
sers00380
Tryptophan metabolism
sers00410
beta-Alanine metabolism
sers00640
Propanoate metabolism
sers00650
Butanoate metabolism
sers00907
Pinene, camphor and geraniol degradation
sers00930
Caprolactam degradation
sers01100
Metabolic pathways
sers01110
Biosynthesis of secondary metabolites
sers01120
Microbial metabolism in diverse environments
sers01200
Carbon metabolism
sers01212
Fatty acid metabolism
Module
sers_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SERRSCBI_16920 (fadJ)
00650 Butanoate metabolism
SERRSCBI_16920 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
SERRSCBI_16920 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SERRSCBI_16920 (fadJ)
00310 Lysine degradation
SERRSCBI_16920 (fadJ)
00380 Tryptophan metabolism
SERRSCBI_16920 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SERRSCBI_16920 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SERRSCBI_16920 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SERRSCBI_16920 (fadJ)
00930 Caprolactam degradation
SERRSCBI_16920 (fadJ)
Enzymes [BR:
sers01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SERRSCBI_16920 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SERRSCBI_16920 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SERRSCBI_16920 (fadJ)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
AIM22962
LinkDB
All DBs
Position
complement(3604490..3606655)
Genome browser
AA seq
721 aa
AA seq
DB search
MSVENALHEQRAKPSAFQLTIRPDNIGVITIDVPGDKVNTLKAEFVEQVNDVLIRAQQHT
ALEGLVIVSGKPDSFIAGADITMIAACTSAKEAETLAKKGQSTLAQIAAFPVPVVAAIHG
ACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLVGAAKALDMILT
GKHIRARQALRMGLVDDAVPQSILLQTAIERVKQGWKHQRELPWQDRLLNGPLGRNLLFS
IVRKKTLAKTHGNYPAAERIIQVVRTGLDHGSASGYEAEARAFGELAMTPQSAALRSLFF
ASTALKKERGGDAQPRALHRVGILGGGLMGGGIACVTATRGGLPVRIKDINETGINHALK
YSWDVLGKRVRSKRMRPAERQKQMMLISGSTDYTGFEQVDIVVEAVFEDLALKQKMVAEV
EANCAPHTVFASNTSSLPIGQIAEQAQRPQQVIGLHYFSPVDKMPLVEVIPHAGTSEQTI
ATTVALAHKQGKTAIVVGDSAGFYVNRILAPYINEAARCLLEGEPIESLDKALVDFGFPV
GPITLLDEVGIDVGTKIIPVLVEALGPRFAAPAAFDAVLKDGRKGRKNGRGFYLYPSEGQ
QRQRRKRADTSLYTLLGVTPKAHMLPATIAQRCVMMMLNEAARCLDEGVIRSARDGDIGA
VFGIGFPPFLGGPFRYMDELGAEKVVKTLDYLRQQHGEHFAPCERLQRMAQQGERFYPLG
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgaaaacgcattgcacgagcagcgcgccaaaccgtcggcctttcaactgacg
atccgccctgacaacatcggggtgatcaccatcgacgtgccgggcgacaaggtcaatacg
ctcaaggccgagtttgtcgaacaggttaacgacgtgctgatccgcgcgcagcagcatact
gcgctggaagggctggtgatcgtttccggcaagccggactcgtttatcgccggcgccgat
atcaccatgatcgccgcctgcaccagcgccaaagaggcggaaacgctggccaagaaaggg
cagagcacgctggcgcagatcgccgccttcccggtgccggtggtggcagccatccacggc
gcctgcctgggcggcgggctggaattggcgctggcctgccacggccgcgtctgttcgctg
gatgacaaaaccgcgctcggtctgccggaagtgcagctgggcctgctgccgggctccggc
ggcactcagcgcctgccgcgcctggtaggcgccgccaaggcgctggacatgatcctgacc
ggcaagcacattcgcgcccgccaggcgctgcgcatggggctggtggacgacgccgtgccg
caatcgattttgctgcagaccgccatcgagcgggtgaaacagggctggaagcatcagcgc
gagctgccgtggcaggatcgtctgctcaacggcccgctgggcagaaatctgctgttcagc
atcgtgcgcaagaaaacgttggcgaaaacgcacggtaactacccggcggcggagcgcatc
attcaggtggtgcgcaccgggctggatcacggcagcgccagcggctatgaagccgaagcg
cgcgcctttggcgagctggcgatgacgccgcaatcggcggcgttgcgcagcctgttcttc
gcttccaccgcgctgaaaaaagagcggggcggcgatgctcagccgcgcgccttgcatcgc
gtcggcattctcggcggcggcctgatgggtggcggtatcgcctgcgtcaccgccacgcgc
ggcggtttgccggttcgcatcaaagacatcaatgaaaccggcatcaatcatgcgctgaaa
tacagttgggacgtgctcggcaagcgggtgcgcagcaagcgcatgcgcccggcggaacgg
caaaaacagatgatgctgatctccggctctaccgattacaccggcttcgagcaggtggat
atcgtggtcgaggcggtgtttgaggatctggcgctgaagcagaagatggtggccgaggtc
gaagcgaactgtgcaccgcataccgtgttcgcctccaatacttcctcgctgcctatcggt
caaatcgccgaacaggcccagcggccgcagcaggttatcggtctgcactacttcagcccg
gtggacaaaatgccgttggtggaagtgatcccgcacgccggcaccagcgaacaaaccatc
gccaccaccgtagcgctggcgcacaagcagggcaagaccgccatcgtggtgggcgacagc
gccggtttttatgtcaaccgcatcctggcgccgtacatcaacgaagcggcgcgctgcctg
ctggaaggcgagcccattgaatcgctggacaaagcgctggtggacttcggctttccggtc
ggccccatcaccctgttggacgaagtgggcatcgacgtcggcaccaagatcattccggtg
ctggtcgaggcgctggggccgcgcttcgccgcgcctgccgcgttcgatgcggtgctgaag
gacgggcgcaaagggcgcaagaacggccgcggcttctatctttacccgagcgaggggcag
cagcgtcagcggcgtaagcgcgcggacacctcattgtatacgttgctcggcgtcacgccg
aaggcgcatatgctgccggcgaccattgcccagcgctgcgtgatgatgatgctgaacgaa
gcggcgcgctgtctggatgaaggcgtgatccgcagcgcgcgcgacggcgacatcggtgcg
gtattcggcatcggtttcccgccgttccttggcggcccgttccgctatatggatgaactc
ggcgccgagaaagtggtgaagacgctggactacctgcgtcagcagcacggcgagcacttc
gcgccgtgcgagcgcctgcagcgcatggcgcagcagggcgaacgtttttacccgctgggg
agttga
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