Serratia sp. SCBI: SERRSCBI_18025
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Entry
SERRSCBI_18025 CDS
T03314
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SERRSCBI_18025 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_18025 (xseA)
Enzymes [BR:
sers01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SERRSCBI_18025 (xseA)
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SERRSCBI_18025 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIM23181
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All DBs
Position
3846558..3847934
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AA seq
458 aa
AA seq
DB search
MSLPVSPSIFTVSRLNQTVRQLLEMEMGQIWLSAEISNLSQPASGHWYFTLKDDRAQVRC
AMFRNSNRRVTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFEQLKQR
LSAEGLFDQQFKQPLPAPAKRVGVITSASGAALHDILQVLQRRDPSLPIVIYPTSVQGAE
APMQIVRAIETANRRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRLEMAMDYYLAQRQQQFTRIH
HRLQQQHPHLRLARQQTLLFKLQRRMEDGMQQQLRLATRRSERIQQRLAQVQPQGRIHRY
QQRVQQQEYRLQQAMERQLNAYRQRFGVACSQLETVSPLATLARGYSVTQTPRGELLKTT
KQAQVGELLKTRLQDGWVESEVKTITVDKKPRKKRAAE
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctgtttcgccttccatttttaccgtaagccgcctgaatcagacggttcgc
caactgctggaaatggaaatggggcagatttggctctccgccgagatctccaacctctcc
cagcccgcctccggccactggtatttcaccctgaaagacgaccgcgcccaggtgcgctgc
gcgatgttccgcaacagcaaccgccgcgtcaccttccggccgcaaaacggccagcaggtc
ttggtgcgcgccagcatcacgctgtatgaaccgcgcggcgactaccagctgatcgccgag
agcatgcagcccgccggcgacggcctgctgcagcaacagttcgagcagttaaaacagcgc
ctgagcgccgaagggctgttcgatcagcagttcaagcagccgctgcccgcaccggccaaa
cgcgtcggggtgatcacctccgccagcggcgcggcgctgcacgatatcctgcaggtattg
cagcggcgcgatccgtcgctgccgatcgtcatctaccccacctcggtgcagggcgcggaa
gcgccgatgcagatcgtgcgcgccattgagaccgccaaccgccgcgatgaatgcgacgtg
ctgatcgtcggccgcggcggcggttcgctggaggatctgtggagcttcaacgacgaacgc
gtggcgcgggcgatcttcgccagccgcattccgatcgtcagcgccgtcggccatgaaacc
gacgtcaccatcgccgacttcgtcgccgacctgcgggcgccgaccccttccgccgccgcc
gaactggtgagccgcaatcagctcgagctgttgcgccagctgcagtcgcagcagcagcgg
ctggagatggcgatggattactacctggcgcagcgtcagcagcagttcacccgcattcat
caccgtttacagcagcagcatccgcatctgcgcctggcgcgccagcagacgctgctgttc
aagctgcagcgccgaatggaagacggcatgcagcagcagctgcgcctggccacccgccgc
agcgaacgcatccagcagcggctggcgcaggtgcagccgcagggccgcattcaccgctac
caacagcgcgtgcagcagcaggaataccgtctgcagcaggcgatggagcgccagctcaac
gcctaccgccagcgtttcggcgtggcgtgcagccagctggagaccgtcagcccgctggcg
acgctggcgcgcggctacagcgtgacgcaaactccgcgcggcgagctgctgaaaaccacc
aagcaggcgcaggtcggcgaactgctgaaaacccgcctgcaggatggctgggtggaaagc
gaggtgaaaaccatcaccgtcgacaaaaagccgcgcaagaagcgcgcggccgagtaa
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