Serratia sp. SCBI: SERRSCBI_18420
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Entry
SERRSCBI_18420 CDS
T03314
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SERRSCBI_18420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_18420
Enzymes [BR:
sers01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SERRSCBI_18420
DNA repair and recombination proteins [BR:
sers03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SERRSCBI_18420
Prokaryotic type
SERRSCBI_18420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIM23256
LinkDB
All DBs
Position
3929975..3930658
Genome browser
AA seq
227 aa
AA seq
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MATSLTWHDVIGKEKEQPYFVETLAFVAAERQAGKTIYPPQKDVFNAFRFTELADVKVVI
LGQDPYHGPNQAHGLSFSVRPGVPAPPSLVNMYKELATDIPGFERPDHGYLQSWAEQGVL
LLNTVLTVEGGRAHSHANLGWETFTDKVIAALNENREGVVFLLWGSHAQKKGNFIDRNRH
HVLKAPHPSPLSAHRGFLGCRHFSQANQLLEQQGLTPIDWMPRLPQA
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggccacctccctcacctggcatgacgtgatcggcaaagagaaagagcagccctatttt
gttgaaacgctcgcctttgttgccgctgagcgccaggccggtaagaccatttatccaccg
cagaaagacgtgttcaacgcgttccgctttaccgagctggcggacgtcaaagtcgtcatc
ctcggccaggatccctaccacggccccaatcaggcgcacggcctctctttctcggtgcgc
cccggcgtgccggcgccgccgtcgctggtgaacatgtataaagagctggcgaccgacatt
cccggtttcgagcgcccggatcacggctacctgcaaagctgggccgaacagggggtgctg
ctgctcaacaccgtgctgacggtggaaggcggccgcgcgcactcgcacgccaacctgggc
tgggaaacctttaccgataaggtgattgccgccctgaacgagaaccgcgaaggcgtggtg
ttcctgctgtggggctcgcacgcgcagaagaaaggcaactttatcgaccgcaaccgccac
catgtgctgaaagcgccgcacccgtcgccgctctccgcgcaccgcggtttcctcggctgc
cgccacttctcgcaggccaatcagctgctggagcagcaagggctcacgccgatcgactgg
atgccgcgcctgccgcaggcgtag
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