Serratia sp. SCBI: SERRSCBI_20170
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Entry
SERRSCBI_20170 CDS
T03314
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
sers
Serratia sp. SCBI
Pathway
sers00330
Arginine and proline metabolism
sers00480
Glutathione metabolism
sers01100
Metabolic pathways
sers01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
SERRSCBI_20170
09106 Metabolism of other amino acids
00480 Glutathione metabolism
SERRSCBI_20170
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
SERRSCBI_20170
Enzymes [BR:
sers01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
SERRSCBI_20170
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Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AIM23600
LinkDB
All DBs
Position
complement(4311314..4313479)
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AA seq
721 aa
AA seq
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MKELKIATSASLVATIETLRQIVRVEQTDYTDVAAVVVSVADVDAGILARLQATGFDIPT
FVAVEGDEHLSPDYLPFVSGVFALLAGASKPFYMAQLEAAADAYEQALLPPFFKTLKTYV
EMENSTFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGSAKDA
QKHAARVFNADKTYFVLNGTSAANKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATP
VYLETARNPFGFIGGIDARCFDERYLREQIREVAPEKATAARPFRLAIIQLGTYDGTIYN
ARQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDEHDPGIFVTQSVHKQQAG
FSQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGPAGRR
MWMDCVKLGIETRKQLLTRCSQLKPFIPLQVAGKDWQDYDTDLIANDARFFTFVPGETWH
GFEGYAQDQYLVDPCKLLLTTPGIDAATGQYTEFGVPATILANFLRENGIVPEKCDLNSI
LFLLTPAENPAKMEQLVEMLAQFERYVEEDAPLSVVLPTVYRKNEQRYRGYSIRRLCQEM
HDLYVSFDVKQLQKEMFRQDHFPPVVMNPQDANVEFIRDNVELVPIGQAEGRIAAEGALP
YPPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYIEKKDHGWKRIFGYMIK
P
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaaaatcgcaaccagcgccagcctggtcgccaccattgagacgctgcgc
cagatcgtgcgcgtagagcagacggactacaccgacgtggcggcggtggtggtgtcggtc
gccgacgtggatgccggcattctggcgcgcttgcaggcgacggggttcgatattccgacc
ttcgtggcggtggaaggggacgagcatctttccccggattatctgccgtttgtcagcggg
gtcttcgcgctgctggccggcgccagcaagccattctacatggcgcagttggaggccgcc
gccgacgcctacgagcaggcgctgctgccgccgttcttcaaaacgctgaagacctacgtc
gagatggagaattcgacctttgcgtgtccaggccatcagggcggcgagttcttccgcaag
cacccggccggccggcagtttttcgatttctacggtgaaactcttttccgttccgatatg
tgcaacgcagacgtcaagctgggcgatctgctgatccacgaaggctcggccaaggatgcg
caaaagcatgcggcgcgggtgttcaacgctgataaaacctacttcgtgctcaacggcacc
tcggcggccaacaaggtggtgaccaacgcgctgctgacccgtggcgatctggtgctgttc
gatcgcaacaaccacaaatccaatcaccacggggcgctgatccaggccggcgccacgccg
gtgtatctggaaaccgcccgcaacccgttcggctttatcggcggcatcgatgcgcgctgc
ttcgatgagcgctacctgcgcgagcagatccgcgaggtggcgccggagaaggccacggcg
gcgcggccgttccggctggcgatcattcagcttggcacctacgacggcacgatttacaac
gctcgccaggtgatcgacaccatcggccacctgtgcgattacatcctgttcgactccgcc
tgggtgggctacgaaggttttatcccgatgctgaaagagtgttcgccgctgctgcttgag
ctggacgagcacgatccgggcatcttcgtcacccagtcggtgcataaacagcaggcgggg
ttctcgcagacctcgcagatccacaagaaagacgaccacatcaaagggcaaaagcgccac
tgcaaccataagcatctgaacaatgcgttcatgctgcatgcgtcgaccagcccgttctat
ccgctgttcgccgcgctggacgtcaacgccaagatgcacgccggccccgccgggcgccgc
atgtggatggactgcgtcaagctgggcatcgagacgcgcaaacagctgctcacgcgctgc
tcgcagctgaagccgtttattccgctgcaggtggcgggcaaggactggcaggattacgat
accgatctgatcgccaacgacgcgcgcttcttcaccttcgtaccgggggagacgtggcac
ggcttcgaaggttacgcccaggatcagtatttggtcgatccgtgcaagctgctgctgacc
acgccggggattgacgccgcgaccggccaatacaccgagtttggcgtgccggccaccatt
ctggccaacttcctgcgcgagaacggcatcgtgccggagaagtgcgatctcaactcgatc
ctgttcctgctgaccccggcggagaacccggccaagatggaacagctggtggagatgctg
gcgcagttcgaacgctatgtcgaagaggatgcgccgctgagcgtggtgctgccgacggtg
taccgcaagaacgagcagcgttaccgcggctacagcattcgtcggctgtgccaggagatg
cacgatctgtacgtcagctttgacgttaagcagctgcaaaaggagatgttccgtcaggat
catttcccgccggtggtgatgaacccgcaggacgccaacgtggagtttatccgcgacaac
gtcgagctggtgccgatcggccaggcggaagggcgcatcgcggcggaaggggccctgccg
tatccgccgggcgtgctgtgcgtggtgccgggcgaagtgtggggcggcgcggtgcagcgc
tacttcctggcgctcgaggagggcatcaaccgcctgccgggcttctcgccggagctgcag
ggggtctacatcgagaaaaaagatcacggctggaagcgcatcttcggctatatgatcaag
ccatga
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