Serratia sp. SCBI: SERRSCBI_22870
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Entry
SERRSCBI_22870 CDS
T03314
Name
(GenBank) primosome assembly protein PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SERRSCBI_22870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_22870
Enzymes [BR:
sers01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SERRSCBI_22870
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SERRSCBI_22870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WHD_PriA
PriA_3primeBD
DEAD
ResIII
Helicase_C
PriA_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_22
WHD_PriA_bact
AAA_19
Zeta_toxin
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AIM24128
LinkDB
All DBs
Position
4915011..4917206
Genome browser
AA seq
731 aa
AA seq
DB search
MPVVHVALPVPLARTFDYLLPPGMQPVAGARVGVPWGRQHAIGIVTGCSDTSELPLDKLK
PIDSVIDTESLFSPSLWRILRWASDYYHYPIGEVLFHALPILLRQGKPAEAAPLWQWFAT
EEGRATPPESLKRAPKQQQALAALLQRPVYRHQVSQLELTESALQALRAKGLIDLRTQVA
ATQDWRPNFAVLGERLRLNTEQATAVGAIRSEDEQFAAWLLAGVTGSGKTEVYLSVLENV
LAKGRQALVLVPEIGLTPQTIARFRERFNAPVDVLHSGLNDSERLAVWLRARSGEAAIVI
GTRSALFTPFRQLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREEDIPMVMGSATPAL
ETLHNVQLGKYRQLKLTQRAGNAKPAAQHLIDLKGLPLKVGLSQPLLKSMQHHLKAGNQV
MLFLNRRGYAPALLCHECGWIAECQRCDHYYTFHQHQRQLRCHHCDSQRPVPHQCPQCGS
THLVSVGVGTEQLEHELAPLFPDTPITRIDRDTTSRKGSLEQHLADIHRGEARILIGTQM
LAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVLLQTHHP
EHPLLQVLLQQGYDAFAKQTLAERNSVFLPPYTSHIIVRAEDHDNQQAPLFLQQLRNLLE
ASPLKDDSLWVMGPVPALQSKRGGRFRWQLLLQHPTRRVLQQLMKSSLPLIGTLPQTRKV
KWTLDVDPIDS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgtacacgttgctttgccggtccccctcgcccgcaccttcgactatctgctg
ccgcccggcatgcagccggtggccggcgcgcgcgtgggcgtgccctggggcaggcagcat
gcaatcggcatcgtcaccggctgcagcgacaccagcgaactgccgttagacaagctcaaa
ccgatcgacagcgtgatcgacacagaatcgctgttctcccccagcctgtggcgcatcctg
cgctgggccagcgattactaccactatcccatcggcgaagtgctgttccacgcgctgccg
atcctgctgcgccaaggcaaaccggccgaggccgcgccgctgtggcagtggttcgccacc
gaagaggggcgcgccacgccgcccgaaagcctgaaacgcgcgccgaaacagcagcaggcg
ctggcggcgctgctgcaacgcccggtctatcgccatcaggtcagccagcttgagctgacg
gaaagcgccctgcaggcgctgcgcgccaaagggctgatcgatctgcgcactcaggtcgcg
gccacgcaggactggcgccccaactttgcggtgctcggcgagcggctgcggctgaatacc
gaacaggctaccgccgtcggggcgatccgaagcgaagatgagcagtttgccgcctggctg
ctggccggggtcaccggctccggcaagaccgaggtgtatctcagcgtgctggaaaacgtg
ttggccaaaggccggcaggcgctggtgctggtgccggaaatcggcctgacgccgcaaacc
atcgcccgctttcgcgagcgcttcaacgcgccggtggacgtgctgcactccgggctgaac
gacagcgaacggctggcggtttggctgcgcgcgcgcagcggcgaagccgcgatcgtcatc
ggcacccgctcggcgctgttcacgccgttccggcaactgggcgttatcatcatcgacgaa
gagcacgacagctcttataaacagcaggaaggctggcgctaccacgcccgcgatctggcg
gtgttccgcgcccgggaagaagatatcccgatggtgatgggctccgccacgccggcactg
gaaacgctgcacaacgtgcagctgggcaaatatcgccagttgaagctcacccaacgcgcg
ggcaacgccaaaccggcggcgcagcatctgatcgatctgaaaggattgccgctgaaggtc
ggcctgtcgcagccgcttttgaaaagcatgcagcaccatttaaaagccggcaatcaggtg
atgctgttcctcaaccgccgcggttacgccccggcgctgctgtgccacgagtgcggctgg
atcgccgagtgccagcgctgcgatcactattacaccttccaccagcatcagcgccagctg
cgctgtcaccactgcgacagccagcgaccggtgccgcaccaatgcccgcagtgcggttcc
acccacctggtatcggtcggcgtcggcaccgaacagctggaacatgagctggcgccgctg
ttccccgacacgccgatcacccgcatcgatcgcgacaccaccagccgcaaagggtcgctg
gaacagcacctggcggatattcatcgcggcgaagcgcgcattctgatcggcacgcaaatg
ctggccaagggccaccattttcccgacgtcacgctggtggcgttgctggacgtggacggc
gcgctgttctccgccgacttccgctccgccgagcgttttgctcagctctatacccaggtc
tccgggcgcgcggggcgagcgggcaaacagggtgaagtgctgctgcaaacccaccacccg
gagcacccgttattgcaggtgctgctgcaacaaggttacgacgccttcgccaaacagacg
ctggcggagcgcaacagcgtgtttctaccgccctacaccagccacatcatcgtgcgcgcc
gaagatcacgataaccaacaggccccgctgttcctgcagcagctgcgcaatctgttggaa
gccagtccgcttaaggacgactcgctgtgggtgatgggcccggtgccggcgctgcagtcc
aaacgcggcggccgtttccgctggcagctgctgctgcagcatccgacacggcgcgtcctg
caacagctgatgaaaagctcgctgccgctgatcggcaccctgccgcaaacgcgcaaggtg
aaatggacgctggatgtcgatccgatcgacagctga
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