Serratia sp. SCBI: SERRSCBI_22875
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Entry
SERRSCBI_22875 CDS
T03314
Name
(GenBank) DNA-binding transcriptional regulator CytR
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
sers
Serratia sp. SCBI
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sers03000
]
SERRSCBI_22875
Transcription factors [BR:
sers03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SERRSCBI_22875
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_Crp_2
MarR_2
ANF_receptor
HTH_3
Sigma54_DBD
HTH_24
TetR_N
MerR
Motif
Other DBs
NCBI-ProteinID:
AIM24129
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Position
4917498..4918526
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AA seq
342 aa
AA seq
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MEHKKELSMATMKDVAEMAGVSTATVSRALMNPEKVSTPTRQKVEQAVLAVGYSPHALSR
NIKRNESRTILVIVPDICDPFFADVIQGIEQTAAQQGYLVLIGDCAQQNQQERTFVNLII
TKQIDGMLLLGSNLPFDASKEEQRNLPPMVMANEFAPELELPTVHIDNLTAAFEAVHYLH
QLGHRQIACVAGPEQMPLSHYRLQGYVQALRRNGITVESSYITRGDFTYEAGAQALTQLM
AQPKPPTAVFCHSDVMAIGVLSQAKKMGLRVPQDLSIVGFDDLKLAQYCDPPLTTVAQPR
FQIGQQAMLLLLEQLNGQTVASGSRLLDSELIIRGSTAAPKR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
ttggaacacaagaaagagttatccatggcgaccatgaaagacgtcgccgaaatggcgggc
gtttcaacggctaccgtatcgcgtgcgcttatgaatccggaaaaggtgtcaacgccaacg
cgtcagaaagtggaacaggccgtgctggccgtgggttattctcctcatgctctgtcacgc
aatatcaaacgcaacgaatctcgcaccatcctggtgatcgtgcccgacatctgcgatccg
tttttcgcggatgtgatccaggggatcgaacagaccgccgcccaacaaggttatctggtg
ctgatcggcgactgcgcgcagcagaaccagcaagaacgcaccttcgtcaatctgatcatc
accaaacagatcgacggcatgctgctgctgggctctaatctaccgttcgacgccagcaag
gaagagcagcgcaacctgccgccgatggtgatggccaatgagttcgcgcccgagctggaa
ctgccgacggtgcatatcgacaacctgaccgccgcctttgaagccgtgcattatttgcat
caattggggcaccggcagatcgcctgcgtcgccgggccggaacagatgccgctgagccat
tatcggctgcaaggttatgttcaagcgctacgccgtaatggcattaccgtcgaaagcagc
tatattacccggggtgattttacctacgaagccggcgcgcaagcgctgacccagttgatg
gctcagccgaaaccgccgacggcggtgttctgccacagcgacgtcatggcgatcggcgtg
ctgtcccaggcgaagaaaatggggctgcgggtaccgcaggatctgtcgatcgtcggcttt
gacgacctcaagctggcgcagtattgcgatccgccgctgaccacggtggcgcagccgcgc
ttccagatcggccagcaggcgatgttgttgctgttggagcagttgaacggccagacggtg
gccagcggctcccgactcttggacagtgaattgattatcagaggcagcaccgctgctccg
aaacgctag
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