Serratia sp. SCBI: SERRSCBI_23310
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Entry
SERRSCBI_23310 CDS
T03314
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sers
Serratia sp. SCBI
Pathway
sers03030
DNA replication
sers03410
Base excision repair
sers03420
Nucleotide excision repair
sers03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sers00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SERRSCBI_23310
03410 Base excision repair
SERRSCBI_23310
03420 Nucleotide excision repair
SERRSCBI_23310
03440 Homologous recombination
SERRSCBI_23310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sers03032
]
SERRSCBI_23310
03400 DNA repair and recombination proteins [BR:
sers03400
]
SERRSCBI_23310
Enzymes [BR:
sers01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SERRSCBI_23310
DNA replication proteins [BR:
sers03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SERRSCBI_23310
DNA repair and recombination proteins [BR:
sers03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SERRSCBI_23310
NER (nucleotide excision repair)
GGR (global genome repair) factors
SERRSCBI_23310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Unstab_antitox
Ribosomal_60s
Motif
Other DBs
NCBI-ProteinID:
AIM24216
LinkDB
All DBs
Position
complement(5003030..5005828)
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDDLFAEYKSHRPPMPDDLRAQIEPLHNMVKAMGLPLLVTPGVEADDVIGT
LALEAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGIGGLDALYGNLENIATLSFRGAKTMAAKLEQNK
EVAYLSYKLATIKTDVELDLTCADLTVSAPDVDTLQQLFKQYEFKRWLADVEAGVWLENK
KGAGAKAAGTAKPAVAAEAPKALAEAKLSQDGYVTILDEATFTDWLARLKKADVFAFDTE
TDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPAQLDRAYVLEALKPLLEDEKALKV
GQNLKFDMSLLARYGIEMRGIAYDTMLESYVLDSVGGRHDMDSLADRYLGHKTITFEEIA
GKGKNQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLKQSAELLTVFNEIEMPLLPVL
SHIERTGVLIDPAILSAHSQELAKRLAELEAQAHELAEEPFNLASTKQLQAILYEKQKLP
VLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSSDPNLQNIPVRNEEGRRIRQAFIAPEGYRIVAADYSQIELRIMAHL
SQDEGLLKAFAEGKDIHRATASEVFGVPLDKVTGEQRRSAKAINFGLIYGMSAFGLARQL
GIPRGEAQRYMDLYFERYPGVLDYMERTRQQASEQGYVSTLDGRRLYLPDVRSSNAMRRK
AAERAAINAPMQGTAADIIKRAMIEVDAWLQGQEKPLVRAIMQVHDELVFEVHESVIDEA
SQRIRQLMEGSMTLAVPLKVDVGVGMNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccactaatcctggttgacggttcctcttacctctaccgc
gcttatcacgccttcccgccgctgaccaactcggcgggcgagccgaccggcgcgatgtac
ggcgtgctgaatatgctgcgcagtctgctgttgcagtatcaaccgagccacgttgccgtg
gtgtttgatgccaaagggaagaccttccgcgatgatctgttcgctgaatacaagtcgcac
cggccgccgatgccggacgatctgcgcgcgcagatcgagccgctgcataacatggtcaag
gcgatgggcctgccgctgttggtgacgcccggcgtagaggcggatgacgtcatcggtacg
ctggcgctggaggctgaaaaggccggccacgcggtgctgatcagcaccggcgacaaagac
atggcgcagctggtgacgccgaacgtcaccttgatcaacaccatgaacaacacgatcctc
ggcccgcaggaagtgtgcgacaaatacggcattccgccggagctgatcatcgacttcctg
gcgctgatgggcgattcatcggacaacattcccggcgtgccgggcgtgggcgagaaaacc
gcccaggcgttgctgcagggtatcggcgggctggatgcgctgtacggcaatctggagaac
atcgccacgctgagcttccgcggcgccaaaaccatggcggccaagctggaacagaataaa
gaggtcgcgtacctctcctataagctggcgacgatcaaaaccgacgtcgagctggatctg
acctgtgcggacctgacggtctccgcgccggatgtcgacacgctgcaacagctgttcaaa
cagtacgagttcaaacgctggctggcggacgtagaagccggcgtctggttggaaaacaag
aaaggcgcgggcgcgaaagctgccggcaccgccaaaccagccgtagccgcggaagcgccg
aaagcgctggcggaggccaagctgtctcaggacggttatgtcaccatcctggacgaagcg
acctttaccgactggctggcgcggttgaaaaaagccgacgtgtttgccttcgataccgaa
accgatggcctggataccctgaccgccaatctgatcggcctgtcctttgcgatcgcgccg
ggcgaagcggcttatttgccggtggcgcacgattatctggatgcgccggcgcagctggat
cgcgcttacgtgctggaggcgctcaagccgctgctggaagacgagaaagcgctcaaggtc
gggcaaaatctgaagttcgatatgagcctgctggcgcgttatggcatcgagatgcgcggc
atcgcctacgacaccatgctggagtcctatgtgctggacagcgtcggcggccgtcatgat
atggacagcctggccgatcgttatcttggccacaaaaccatcactttcgaagagatcgcc
ggcaagggcaagaaccagctgacgttcaatcagatcgcgcttgagcaggcggcgccatac
gctgccgaagacgccgatgtcacgctgcagctgcatctggcgatgtggccgcagctgaaa
cagagcgcggaactgctgacggtgttcaacgagattgaaatgccgctgctgccggtgctg
tcgcatatcgaacgcaccggggtgctgatcgatccggccattttatcggcccactcccag
gagctggccaagcgtctggctgagctggaggcgcaggcccacgagctggcggaagagccg
ttcaacctggcgtcgaccaagcagctgcaggctatcttgtacgaaaaacaaaagctgccg
gtgctgaagaaaaccccgggcggggcgccatccaccaacgaagaagtgctggccgagctg
gcgctcgactacccgctgccgaaggtgattctggaataccgcggcctggcgaagctgaag
accacctataccgacaagctgccgctgatgatcaatccggtcagcgggcgggtgcatacc
tcgtaccatcaggcggtgaccgccaccggccgcctctcctcgagcgatccgaacctgcag
aacatcccggtgcgcaacgaagaagggcggcgcattcgccaggcctttattgcgccggaa
ggctaccgcattgtcgcggccgactactcgcagatcgagctgcgcatcatggcgcatctg
tctcaggatgaagggctgctgaaggcctttgccgaagggaaagacattcaccgcgccacg
gcgtcggaagttttcggcgtgccgttggataaagtgaccggcgagcagcgccgcagcgcc
aaggcgattaactttggtttgatttacggcatgagcgccttcggcctggcgcgtcagctg
gggatcccgcgtggggaagcccagcgctatatggatctctacttcgaacgttacccgggc
gtgctggattacatggagcgcacccgtcagcaggcttccgagcagggctatgtcagcacg
ctggacggccgccgtctgtatctgccggacgtccgctccagcaacgccatgcgccgcaag
gcggccgagcgcgccgccatcaacgccccgatgcagggcacggcggccgatatcatcaag
cgtgcgatgatcgaggtcgacgcctggctgcaggggcaggagaagccgttggtacgcgcg
atcatgcaggtgcacgatgaattggtgttcgaggtgcacgagtcggtgatcgacgaagcc
agccaacgtatccgccaactgatggaaggcagcatgacgctggcggtgccgctgaaggtc
gatgtgggcgtcggcatgaactgggatgaggcgcactga
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