Serratia sp. SCBI: SERRSCBI_23686
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Entry
SERRSCBI_23686 CDS
T03314
Name
(GenBank) conjugal transfer nickase/helicase TraI
Organism
sers
Serratia sp. SCBI
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
TraI_C
TraI_hel_assoc_N
AAA_30
TraI_2B
ssDNA_TraI_N
AAA_19
UvrD_C_2
AAA_11
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
AIM24249
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All DBs
Position
SCBI_Pl:complement(10118..15400)
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AA seq
1760 aa
AA seq
DB search
MMSIGQVGPAGKAGDYYTHQDNYYVLGSMDERWVGQGAEALGLSGKVDVKDFVAVLEGKL
PDGSDLTRMVGGENKHRPGYDLTFSAPKSVSIMAMLGGDKRLIAAHNHAVEVAVREIEKM
ASTRVMEGGVSETKLTGNLVVALFNHDTSRDLDPQLHTHAVVANVTQHDGKWQTLSSDTV
GKTGFIENVYANQIAGGQIYRHILQREVEAMGYETETTGPHGMWEFKRTEAVREPFSKRS
HAIDAAAGPDASLKSRDMATLDTRKAKVTPDQAELFVAWMQEMKATGFEPKSYQAEAQSR
TMVTPSPTPLEAGGDALVDQAVGQAISALSDRQVNFTHNQVANKAISYLTGEPGMLDAVR
DGIDRAIEREQLIPLDKEKGVFTSDIHLLDELSVAQLSRTHLDESAVVIGAPKSDPRTGS
HPAYSDAVQQLAQHAPAMAVLSGIGGASVNRSRVAEVVELAREQGRDATVLTVDRQSQQY
LQQSVHLDESRVVTRAALGTEALFAPNSTLVVDQAEKLTLKETVALLDGAVRNNVQLVLM
DTEKRKGTGNALAVMKEAGVPRYQFSGRQAAVAAVVSEPDKAQRFGQLAKGVVQALVEDR
PAVAQVNGPADQRMLTAMIRDELKNTGLLGRDETHVATLTPVWLDSKNRGAIDTYREGMV
MERWDAESRQRERFVIERVGAQTRNLVLRNAEGEKQRLAVKDVDKDWSLFRAGTMGVADG
ERLRVLGQEGRGKDTLKAGTALTVVVAGAGELRVKVAGEPDATQKPADRALAVGGDVFSA
IKVAPAYVESLGASVSSTAAVYAAVKKNELNSATLSGIARSGGHITLYSALDARKTQEKV
AQHPAYRLAGEQVKQLAGVEGLDAAIAGQKTSLFTPAQQAIHLAIPTLEGDSVAFGQAKL
LAGSLGFAAKGVSMEAIQTEIEAQVKRGELLKVDVAPGVGADLLVSRASFEAEKSIIRLI
ADGKDSMPALMSGSARNQLASSQSSLTQGQKESVDLILGTTDRFVAIQGYSGVGKTTQFR
AVLAGINQLPESEQPRVVGLAPTHRAVGEMQAAGVDAQTLASFLHDEGLKVASGEKPDYR
NTLFVVDESSMVGNSDMARAYALIAEGNGRAVMSGDEAQLEAIAPGAPFRLAQGRSAIDM
AVMKEIVRQTPELKPAVYKMIDNDVPGALDVVRSVAPANVPRQADAWVPTQSVVEYPAKG
PDDIHAAIVSDYLGRTEAARRDTLIITHLNADRHIINAGIHGERKAAGELKGESVTLPIL
ETANIRDGELRKLETWARNRDAVVLLDNTYYRMAGIDSQSRTVSLQDSEGNTRQYSPASA
VREGITLYNSRTIEVSVGDRMRFSKSDVERGHVANSAWTVEAIKGDMVTLFDGQQTRIVN
PREQQQDRHVDLAYAITAHGAQGASERFAITLEGVEGGREPLVNRASAYVALSRAKEHVQ
VYTDNEAGWLNAIGKAKARSTAHDAVLGMAPGSQKAAVDLYGKASSLSENALGRAVLRGS
QLTGDTLAHYVSPGKKYTQPHAMLPMYDANGKPAGAWLAPLADTQGKSVGGLPTQGRVFG
SDSAQFVALQGSRNNETRLAGTMQDGIRLAARYPDSGVVVRLQGDDVPFNPQAMTGGRVW
VNDETLKATARESGASDSAITLPESPEERLQRELQAQADKLGREPNASDPQQLAGLNDKQ
LRALFARGELRAEDVKARLPEAVMREVMGQDAALRVDAAVRQVAREPVSTRSRLQQDEQN
LVRDTHPERELNKEKTLGGD
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcattggccaggtcggccccgccggtaaagccggcgactactacacccatcaa
gacaactactacgtgctgggcagcatggacgaacgctgggtgggccagggcgcggaagcc
ctgggcctgtctggcaaggtggacgttaaagatttcgtggctgtgctggaaggcaagttg
ccggacggcagcgacctgacccgcatggtcggtggcgagaataaacaccgccccggctat
gatctgacgttctcggcgcccaaaagcgtttccattatggcgatgctgggcggcgataaa
cgccttatcgcagcgcataaccacgcggtagaggtcgcggtgcgggaaatagagaaaatg
gcctcgacgcgggtgatggaaggtggcgtctccgagaccaaactgaccggcaacttggtt
gttgcgctctttaaccacgatacgtcacgcgaccttgacccacagctgcacacccatgcg
gttgtggccaacgtcacgcaacatgacggcaagtggcagaccctgtcctccgatacggtc
ggcaagaccggctttatcgagaacgtgtacgccaaccagatcgcgggtggtcagatatac
cgccatatcctgcagcgggaagttgaggcaatggggtatgagaccgaaactaccgggcca
catggcatgtgggaattcaaaagaacggaggcggtaagggaaccgttctccaagcgcagc
catgccatcgacgctgctgccggccctgatgcttcgctcaagtcgcgggatatggcgacg
ctcgatacccgcaaggccaaggtcacccctgaccaggccgagttgtttgtcgcctggatg
caggaaatgaaggccactggttttgaacccaaatcgtatcaggccgaggcgcagtctcgc
acgatggtgacgccgtccccgacgccgctggaagcggggggcgacgcgcttgtcgaccag
gcagtggggcaggccatttcggcgctctctgaccggcaggtcaacttcacgcacaaccag
gtggccaacaaggctatcagctacctcaccggggagccgggcatgctggacgcggtgcgc
gacggcatcgaccgcgccatcgagcgcgagcagcttattccgctcgacaaggagaagggc
gtctttacctccgatattcatctgctcgatgagctgagcgtggcgcagctgagccgcacg
caccttgacgagagcgcggtggtgatcggtgcgccaaagtctgacccgcgcaccggaagc
cacccggcctacagcgatgccgtgcagcagttggcgcagcatgcgccggcgatggcggtg
ttgtcgggcattggaggcgcatcggtgaaccgttcccgcgtggcggaagtggtggagttg
gcgcgcgaacagggccgcgacgccaccgtgctgaccgttgatcggcagtcacagcagtat
ctgcagcaaagcgtccatctcgatgaaagccgcgtggtgacgcgcgctgcgctcggcacc
gaggcgctgtttgcgccgaacagcacgctggtcgttgatcaggcggagaaactgacgctc
aaggagaccgtagcgctgctggatggcgccgtgcgtaacaacgtgcagttggtgctgatg
gataccgaaaagcgcaaggggacgggcaatgcgcttgccgtcatgaaggaggccggtgta
cctcgctatcagttcagtggccgtcaggcggcggtggcggcggtggtgagcgagccggac
aaggcgcagcgcttcggtcagttggccaaaggcgtggtgcaggcattggttgaagaccgg
ccggcggttgcgcaggtcaacggcccggccgaccagcggatgctgacggccatgatacgt
gacgagctgaaaaataccgggctgctgggacgcgatgagacccatgtggccacgctgaca
ccggtgtggctggacagcaaaaatcggggtgccatcgatacctaccgggaaggcatggtg
atggagcgctgggatgcggagagccggcagcgcgagcggttcgttatcgagcgggtcggt
gcgcaaacgcgcaacctggtgttgcgtaacgccgagggtgaaaaacagcggcttgccgtc
aaagacgtggacaaggactggtcgttgttccgggccggtacgatgggtgttgccgacggc
gaacgcctgcgggtgttgggccaggaggggcggggcaaggatacgctgaaggccggcacg
gcgctgacggttgtagttgccggcgccggcgagctgcgggtaaaagtggccggcgagccg
gatgcgacgcagaagccggcggaccgagcgcttgcggttggcggcgacgtcttcagcgcc
atcaaggtggcgccggcgtatgtggaaagcctcggcgcctcggtgagcagtacggcagcg
gtctatgccgcggtgaagaaaaacgaacttaacagcgccacgctgagtggcatcgcccgc
agcggcggacacatcaccctctattcagcgctcgatgcgcgcaaaacgcaggaaaaagtc
gctcagcatccggcgtaccgtctggcaggcgagcaggtcaaacaactggccggggtggag
gggcttgatgccgcgatcgccgggcagaaaacatctctgtttacgccggcgcagcaggcc
attcatttggccataccgacgctggaaggggatagcgtcgcgtttggtcaggccaaactg
ctcgccggtagtctcggttttgcggccaaaggcgtgtcgatggaggccatccagacggaa
atcgaagcgcaggtcaaacgtggggagctgctgaaagtggatgtcgcgcccggcgtcggg
gcggatttgctggtctcgcgcgccagcttcgaggcggagaaaagcattattcgtctgatc
gccgatggcaaagacagtatgccggcgctgatgagtggatcggcgagaaatcaactggca
tcaagtcaaagctcgcttacacaggggcagaaagagagtgttgacctcattctcggtacg
accgaccggtttgtggcgatccagggctattcgggcgtggggaaaaccacccagttcaga
gccgtcctggccgggataaaccagttacctgaaagtgaacagccccgcgtggtagggctg
gcgccaacgcaccgcgcggtcggggaaatgcaggcggccggcgtcgatgcccaaaccctg
gcatcgttcctgcacgatgaagggctgaaggttgccagcggcgagaaaccggactaccgc
aacacgctgtttgtggtggatgagagttcgatggtgggcaacagcgacatggcgcgcgcc
tacgcgttgattgccgagggcaacggccgcgcggtgatgagcggtgacgaggctcagctg
gaggcgattgcgccgggcgcgccgttccggctggcgcaggggcgcagcgccatcgatatg
gcggtcatgaaagagattgtgcgccagacccccgagctgaagcctgcggtgtacaagatg
attgataacgatgtgcccggcgcattggacgtggtgcgctcggtggcgccggccaacgta
ccccggcaagccgatgcctgggtgccgacgcagtcggtcgttgaatatcccgccaagggg
ccggatgacattcatgccgcgattgtcagcgattacctgggacgcaccgaagcggcccgg
cgcgatacgctgatcatcacccacctcaatgccgaccggcacatcatcaatgccggcatt
cacggcgagcgtaaggcggccggggagctgaagggcgagtccgtcaccttgcctatcctt
gagaccgccaatattcgtgacggcgagctgcgcaagctggagacctgggcgcgcaaccgg
gacgccgttgtcctcttggataacacctactaccgcatggccggcatcgacagtcagtcc
cgtaccgtcagcctgcaggacagcgagggtaatacccggcagtattccccggccagtgcg
gtgcgcgaaggcatcacgctgtacaactcgcgcaccatcgaggtgagcgtgggtgaccgc
atgcgctttagtaaatcggacgtcgaacgcgggcatgtggccaacagcgcctggacggtc
gaggcgataaaaggtgacatggtcacgctttttgatggacaacagacccgtatcgtcaat
ccccgcgagcagcaacaagaccggcacgtcgatttggcctatgccatcaccgcccacggt
gcccagggggccagcgaacgttttgccatcacgctcgagggggtggaaggcgggcgtgag
ccgctggtcaaccgggcgtcggcctatgtggcgctctcgcgcgccaaggagcacgtgcag
gtgtacaccgacaacgaagccgggtggctgaatgctatcggcaaggcgaaggcgcgcagc
acggcccatgatgcagtgctggggatggcgccgggcagccagaaagcggccgtcgacctc
tacggcaaagcgagctcgttatccgaaaacgcgctgggacgcgcggtgctgcgcggtagc
caacttaccggcgacacgctggcgcattatgtgtctccgggtaagaagtatacgcagccc
cacgccatgctgccgatgtatgacgccaacggcaaaccggccggcgcttggctggcgcct
ctagcggacactcaggggaaaagcgtcgggggactgccgacgcaggggcgagtgttcggc
agtgacagcgcgcagttcgtggcgctgcaggggagccgcaacaacgagaccaggctggcc
gggacgatgcaggacggtatccggctggcggcacgctatcccgacagtggcgtggtggta
cgtctgcagggtgacgacgtgccgttcaacccccaggcgatgaccggtggcagggtgtgg
gtgaacgacgagacgctcaaggccacagcgcgggagagcggcgcgtccgacagtgccatc
acattgccggagagcccggaagaacgcctgcagcgtgaactgcaggcgcaggccgacaaa
ctgggccgtgaacctaacgcctctgacccgcagcaactggccgggcttaacgacaagcag
ctgcgggcgttgttcgcgcgcggcgaactgcgcgccgaggacgtgaaagcgcgtctgccg
gaggcggtcatgcgggaggtgatgggtcaggatgcagcactgcgggtcgatgccgctgtc
cgccaggtggcgcgcgagccggtatcgacacgcagccggctgcagcaggacgaacagaat
ctggtgcgcgatacccatcctgagcgggaactgaacaaagagaaaaccctgggcggcgac
tga
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