Serratia sp. Tan611: TAN611_0470
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Entry
TAN611_0470 CDS
T10950
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sert Serratia sp. Tan611
Pathway
sert03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TAN611_0470 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sert03019
]
TAN611_0470 (pnp)
03016 Transfer RNA biogenesis [BR:
sert03016
]
TAN611_0470 (pnp)
Enzymes [BR:
sert01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TAN611_0470 (pnp)
Messenger RNA biogenesis [BR:
sert03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TAN611_0470 (pnp)
Transfer RNA biogenesis [BR:
sert03016
]
Prokaryotic type
tRNA degradation factors
TAN611_0470 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
OB_PDCD11
S1_RRP5
KH_2
KH-I_KHDC4-BBP
KH_SLS1_2
S1_TP0910
Motif
Other DBs
NCBI-ProteinID:
CAE1141927
LinkDB
All DBs
Position
Tan611:494049..496169
Genome browser
AA seq
706 aa
AA seq
DB search
MLTPTIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDHFLNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFSGPIGAARVGYINDQYVLNPTVDELKESRLDLVVA
GTAGAVLMVESEAEVLSEDQMLGAVVFGHEQQQVVIDNINSLVAEVGKPKWDWQPTPVNE
ALQARVAELAQSRLGDAYQITEKQERYAQVDAIKEDVTAALLEQDETLDAADIQDALGDL
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNLDELMGEKTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAMMPKPED
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDENFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISQFAPRIHTMKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYQGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATASEAAAPAAPEAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacaccgactattcgcaaattccagtatggccagcataccgtcaccattgagacc
ggtatgatggcgcgtcaggcgactgccgccgttatggtaagcatggacgacactgccgta
ttcgttacggttgtaggccagaaaaaagccaagcctggccagagcttcttcccgctgacc
gtgaactatcaggagcgtacctacgccgccggccgtatcccgggcagcttcttccgccgt
gaaggccgtccaagcgaaggcgaaaccctgacttcccgtctgattgaccgtccaatccgc
ccactgttcccggatcacttcctgaacgaagtgcaggtgattgcgaccgtggtttccgtt
aacccacaggttaacccggatatcgtggcgatgatcggcgcatctgcggcactgagcctg
tcaggcattccgttcagtggcccaatcggcgcagcgcgcgtgggttacatcaatgaccag
tacgtactgaacccgaccgttgacgagctgaaagagagccgtctggatctggtggttgcc
ggtaccgctggcgcagtgctgatggttgagtccgaagccgaagtgctgagcgaagatcag
atgctgggcgccgtggtgtttggccacgaacagcagcaggtggttatcgacaacatcaac
tcactggttgctgaagtcggcaaacctaagtgggactggcagccgaccccggttaacgaa
gcgctgcaggcgcgcgtagccgaactggcgcaaagccgtctgggtgatgcttaccagatc
actgaaaagcaggagcgctacgcacaggttgacgccatcaaagaagacgtcaccgccgcg
ctgctggagcaagacgaaacgctggacgctgcagacattcaggatgccttgggcgatctg
gagaagaacgtggtgcgtagccgcgtactgcgcggcgagccgcgtatcgacggccgtgaa
aaagacatgatccgtggtctggacgtgcgtaccggcgtgctgccgcgtacccacggttcc
gcgctgttcacccgtggtgaaacgcaggctctggttaccgccactctgggtaccgcgcgc
gacgcgcagaacctggatgagctgatgggcgaaaagaccgacagcttcctgttccactac
aacttccctccatactccgtgggcgaaaccggcatggtcggttcacctaagcgtcgtgaa
attggtcacggtcgcctggcgaaacgcggcgtattggctatgatgcctaaaccggaagat
ttcccgtacaccgttcgcgtggtgtccgagatcactgaatccaacggttcttcttccatg
gcttccgtctgtggcgcatctctggcgctgatggatgcaggtgtgccaatcaaggccgcg
gttgcaggtatcgccatgggtctggtaaaagaagacgaaaactttgtggtactgtcggac
attctgggcgatgaagatcacctgggcgacatggacttcaaagtggccggtagccgtgac
ggcatcaccgcgctgcagatggatattaaaattgaaggcatcacccgcgaaatcatgcag
gtggcgctgaaccaggccaagggtgcgcgtctgcacattctgggcgtgatggaacaggcg
atcagcacgccgcgcggcgatatctctcagttcgcaccgcgtatccacaccatgaagatc
aatccggacaaaattaaggatgtgatcggtaaaggcggctctgtgattcgtgcgctgacc
gaagagactggcactaccattgaaatcgaagatgatggtacagttaaaatcgcagcgacc
gacggtgagaaagctaaatacgcgattcgtcgtattgaagagatcaccgccgagatcgaa
gttggccgcatttaccagggtaaagtgacccgtatcgttgactttggcgcctttgtggcc
atcggcggcggtaaagaaggcctggtgcatatttctcagatcgccgacaagcgcgttgag
aaagtgaccgactatctgcagatgggccaggaagtgccggttaaggtgctggaagttgat
cgccagggccgtgtgcgcctgagcatcaaggaagccactgcctctgaagcggcggcgcct
gctgcgcctgaagcagaataa
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