Serratia sp. Tan611: TAN611_0872
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Entry
TAN611_0872 CDS
T10950
Symbol
ffh
Name
(GenBank) Signal Recognition Particle (SRP) component with 4.5S RNA (ffs)
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sert Serratia sp. Tan611
Pathway
sert02024
Quorum sensing
sert03060
Protein export
sert03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
TAN611_0872 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TAN611_0872 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TAN611_0872 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sert02044
]
TAN611_0872 (ffh)
Enzymes [BR:
sert01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
TAN611_0872 (ffh)
Secretion system [BR:
sert02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
TAN611_0872 (ffh)
Eukaryotic Sec-SRP protein
TAN611_0872 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_31
cobW
AAA_30
AAA_24
Helicase_RecD
KTI12
YqeC
AAA_33
APS_kinase
Fe-ADH_2
AAA_14
VirC1
AAA_16
TsaE
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
CAE1142798
LinkDB
All DBs
Position
Tan611:933547..934908
Genome browser
AA seq
453 aa
AA seq
DB search
MFENLTDRLSRTLRNISGRGRLTEENIKETLREVRMALLEADVALPVVRDFINRVKESAV
GHEVNKSLTPGQEFVKIVKGELIAAMGEVNTELNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLKEKQKKKVLVVSADVYRPAAIKQLETLAENVGIDFFPSDAKDKPIDIVNRALQQAK
LKFYDVLIVDTAGRLHVDEAMMDEIKQVHAAINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRVASRILGMGDV
LSLIEDIESKVDREQAEKLASKLKKGDGFDLTDFLDQLKQMRNMGGMASMLSKLPGAGQL
PDNVKSQMDDKVLVRMEAIINSMTQKERAKPEIIKGSRKRRIAMGSGMQVQDVNRLLKQF
DEMQRMMKKMKKGGMAKMMRNMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatttaaccgatcgattatcgcgcacactgcgcaatatcagcggccgcggg
cggctgacagaagagaatatcaaggaaaccctgcgcgaagtgcgcatggcattgctggaa
gccgacgtggcgctgccggtggtgcgggactttatcaatcgcgtgaaagagagcgcggtc
ggtcatgaagtcaacaagagcctgacgccggggcaggagttcgtcaaaatcgtcaagggc
gagctgatcgccgcgatgggcgaggtgaacaccgaactgaacctggcggcacagccgccg
gcggtggtgctgatggcgggcctgcagggcgccggtaaaaccaccagcgtcggtaagctc
ggcaaattcctgaaagagaaacagaagaagaaagtactggtggtgtctgccgacgtttat
cgccctgcggcgatcaaacagctggagaccctggccgaaaacgtcggcatcgacttcttc
ccgtccgacgccaaagacaagccgattgatatcgtcaaccgcgcgctgcagcaggcgaag
ctgaagttctatgacgtgctgatcgtcgataccgccggccgtttgcacgtcgacgaagcg
atgatggacgaaatcaaacaggtgcacgcggcgattaacccggtggaaacgctgtttgtg
gttgacgccatgaccggtcaggacgccgccaataccgcgaaagcctttaatgaagcgctg
ccgctgaccggcgtggtgctgaccaaggttgacggcgatgcacgcggcggtgccgcgctg
tccattcgtcacatcaccggcaaaccgatcaaattcctgggcgtcggcgagaaaaccgaa
gcgctggagccgttccacccggatcgcgttgcctcgcgcattctcggcatgggcgacgtg
ctgtcgctgatcgaagatatcgagagcaaggttgaccgcgagcaggctgaaaaactggcc
agcaagctgaaaaagggcgacggcttcgatttgaccgacttcctggatcagctgaagcag
atgcgcaatatgggtggtatggccagcatgctgagcaaactgccgggcgcgggccagctg
ccggataacgtcaaatcgcagatggacgacaaggtgctggtgcgtatggaagcgatcatc
aactcgatgacgcagaaagagcgcgccaaaccggaaatcatcaaaggctcgcgcaagcgc
cgcatcgcgatgggttccggcatgcaggtgcaggacgttaaccgtctactcaagcagttt
gacgaaatgcagcgcatgatgaagaagatgaaaaagggcggcatggcgaagatgatgcgc
aacatgaaaggcatgatgccgccgggcttcccgggccgctaa
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