Serratia sp. Tan611: TAN611_1036
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Entry
TAN611_1036 CDS
T10950
Symbol
sbcC
Name
(GenBank) exonuclease, dsDNA, ATP-dependent
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sert Serratia sp. Tan611
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sert03400
]
TAN611_1036 (sbcC)
DNA repair and recombination proteins [BR:
sert03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TAN611_1036 (sbcC)
Archaeal homologous recombinant proteins
TAN611_1036 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_23
SMC_N
cobW
ABC_tran
nSTAND3
AAA_21
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
CAE1143175
UniProt:
A0A7S4H0N5
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All DBs
Position
Tan611:complement(1083971..1087225)
Genome browser
AA seq
1084 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFSAEPFASNGLFAITGPTGAGKTTLLDAVCLALYHQTPR
LHVSPSQNDLMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNDPNGNLQAPKVELALLAD
GKILADKVRDKLEAVAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGQLSERVFEQHKQAKLELDALHQRASGIELLSDEQRQQLETQLDALRQEETALSQHDEQ
QRQTLNWLQQWQRLQQQLQQCRQRLQALQQEQEQAEPQLQTLARSEPAEKLRPLHNERQR
YRDELQASQQQLTQLDQQQQQQAAQMAPLQQALEQARAEQQTQAAHRQQQQQLIDEQVLP
LDHHIAQLSKSRSELQQTRDDAVRQCGQQKQTLDKLHAERAQLATQAEQHQTQLSALTQA
LAAQQQQHSVLEAETPLAALRQRLQQLSDLRPTRQQLATLSSLAQQLDQRLTQQRQELAA
GQQQLQQLAPQLEQARQQYQQHKTLQAEVEKTHELEQRIVSLEAERARLQTDAPCPLCGS
TEHPAITDYQTLNPSASARRLDELRQQGEALYKNGIELRARHDGMQQQQQRQQQAIEQDE
QQLAAHQQRWQTLTAELAFDFGLQESERLKQWLSDCDREEREGQQRLSQHEQAAQAVQQA
KDALIALQNAQQQAQQQTALLNERLTLLEKQYADAQQQQQRLQQQWQDNEEQLAAQQRQR
LALFGEQPVAQAREQLRAKQAACELASQQAAERWQQAQEQRERLNGQLAGLQQQLAQQTQ
RAEQAQQQWQQALSASEFADDAAFHAALLDDAQRQHLQQLKEQLQQRQVETRALLAQAEQ
AREQHQQQRPQGVDDQHADLTALAQQQQALAQQLKTLQLRQGELRNQLTSDTERRGNQQA
LFAQIAQSQRQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLSRLHGRYLLQ
RKNSDALELLVVDTWQADAQRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQY
RVEG
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctgagcctacggctgaaaaacctcaactcgctgcagggcgagtggaaaata
gacttcagcgccgaaccgttcgccagcaacggcctgttcgccatcaccggcccgaccggc
gcgggcaaaaccaccctgctcgacgccgtctgcctggcgctgtatcaccagacgccgcgg
ctgcacgtctcccccagccagaacgatctgatgacgcgccatactgccgaatcgctggcc
gaggtggagttcgaggtcaaaggcgtcggctaccgcgccttctggagccagcgccgggcc
aaaaacgatccgaacggcaacctgcaggcgccgaaggtcgagctggcgctgctggcggac
ggcaagatcctcgccgataaggtgcgcgacaagctggaggcggtcgccgccatcaccggc
ctggacttcggccgttttaccaaatcgatgatgctgtcgcaggggcagttcgccgccttc
ctcaacgccgacgccaacgatcgcgccgaactgcttgaagaactcaccggcaccgaaatc
tacggccagctgtccgagcgggtgttcgaacagcataagcaggccaaacttgagctggat
gcgctgcaccagcgcgccagcggtattgaactgctgagcgacgaacagcgccaacagttg
gaaacccagctcgacgcgctgcgtcaggaagaaaccgcgctcagtcagcacgatgaacag
cagcggcagacacttaactggctacaacagtggcagcgtctgcagcaacagctgcaacag
tgccggcagcgcttacaggcgctgcaacaggaacaggagcaggccgaaccgcagctgcag
acgctggcgcgcagcgaacccgccgaaaaactgcgcccgctgcacaatgaacgccagcgc
taccgcgatgaactgcaggcatcgcaacagcagttgacccagcttgaccaacagcaacag
cagcaggccgcacaaatggcaccgctgcagcaggcgctggagcaggcgcgcgccgaacaa
cagacacaggcggcgcaccggcaacagcagcagcagctgatcgacgaacaggtgctgccg
ctcgatcaccacatcgcacagctgagcaaaagtcgtagcgaactgcagcaaacccgcgac
gacgccgtgcgccagtgcggacagcagaaacagacgctggacaaactgcacgccgaacgc
gcacagctggcgacacaggccgagcaacatcagacgcagctgagcgccctgactcaggcg
ctcgccgcacaacagcagcagcacagcgtgctggaagccgaaacgccgctggccgccctg
cgccagcgcctgcagcagctgagcgacctgcgcccgacgcgccagcagctggcgaccctg
tcctcgctggcacagcagttggatcaacggctgacgcaacagcggcaggagttggccgcc
ggccagcaacagctgcaacagctggcgccgcagttagaacaggccagacagcagtatcag
cagcacaaaaccctgcaggcggaagtagagaaaacccatgagcttgagcagcgcattgtc
agtctggaagccgaacgcgcccggctgcagaccgacgcgccctgcccgctgtgcggctct
accgagcacccagccatcaccgattatcagacgcttaacccgtcagccagcgcccggcgc
cttgacgagctgcgccagcagggcgaagcgctgtataaaaacggcatcgagctgcgcgcc
cgtcacgacggtatgcagcaacagcagcagcgtcagcagcaggcgattgagcaggatgaa
cagcaactggcggcccaccagcaacggtggcagaccctgaccgccgagctggcgtttgat
ttcggcctgcaggagagcgagcgcctgaagcagtggctgagcgactgcgaccgcgaagag
cgcgagggccagcagcgcctcagccaacatgagcaggcggcgcaggcggtgcaacaggcc
aaagatgcgctgatcgcgttgcagaacgcacagcagcaggcgcagcagcagacagcgctg
ctgaatgaacgcctgacgctgctggaaaaacagtatgccgacgctcagcagcagcagcag
cgtctgcagcagcagtggcaggacaacgaggagcagctcgccgcccagcaacggcagcgc
ctggcgctgtttggcgagcagccggtggcgcaggcgcgcgaacagctgcgcgccaaacag
gcggcctgcgaactggccagccagcaggccgccgaacgctggcagcaggcgcaggaacag
cgtgaacgcctgaacggccagttggcggggctgcagcagcagctggcgcagcaaacgcag
cgcgccgagcaggcgcagcagcagtggcagcaggcgctgagcgccagtgaatttgccgat
gacgccgccttccacgccgccctgctggacgatgcgcagcgtcagcatctgcaacagctg
aaagagcagctgcaacagcgtcaggtggaaacccgcgcgctgctggcgcaggccgaacag
gcgcgcgagcagcaccagcagcagcgcccgcaaggtgtggatgaccaacatgccgatctc
acggcgctggcacagcagcagcaggcgctggcgcagcagttgaagacgctgcagctgcgt
cagggcgagctgcgcaaccagctgaccagcgacaccgagcgtcgcggcaatcagcaggcg
ctgttcgcgcaaattgcccagagtcagcggcagtatgacgactggagctacctcaaccag
ctgatcggctcaaaagaaggcgataaattccgtaaattcgcccaggggctgacgctcgat
catctggtctatctggcgaacaaccagctcagccgcctgcacggccgctatctgctgcag
cggaaaaacagcgatgcgctggaactgctggtagtggacacctggcaggccgacgcgcag
cgcgacacccgcacgctgtccggcggcgaaagttttctggtcagtctggcgctggcgttg
gcgctgtccgatctggtcagtcacaaaaccagcatcgattcgctgttcctggacgaaggc
ttcggcacgctggatgccgagacgctggataccgcgctggacgcgctcgacagccttaac
gcctccggcaagaccatcggcgtgatcagccacgtcgaggcgatgaaagagcggatcccg
gtgcagatcaaagtgaaaaaggtcaacggcctggggatcagccggctggagccgcagtac
cgcgtcgaaggctaa
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integrated database retrieval system
