Serratia sp. Tan611: TAN611_2195
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Entry
TAN611_2195 CDS
T10950
Symbol
ycfS
Name
(GenBank) putative L,D-transpeptidase YcfS
KO
K19236
L,D-transpeptidase YcfS
Organism
sert Serratia sp. Tan611
Pathway
sert01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
TAN611_2195 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sert01002
]
TAN611_2195 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sert01011
]
TAN611_2195 (ycfS)
Peptidases and inhibitors [BR:
sert01002
]
Cysteine peptidases
Family C82
TAN611_2195 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
sert01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
TAN611_2195 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
CAE1145619
UniProt:
A0A7S4H2J5
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All DBs
Position
Tan611:2276404..2277420
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AA seq
338 aa
AA seq
DB search
MKRALTLMGVLFASVLAGSQAANATEYPLPPANSRLIGENTTYTVPDAGLSLEAIAAKYQ
IGLLGMLEANPGTDPYLPKPGKVLTIPTQMLLPDTKREGIVVNLAELRLYYYPKGEDKVI
VYPIGIGQTGMHTPLKVTSVSQKIPNPTWTPTANIRKRYAAKGETLPAVVPAGPNNPMGL
FAMRLSMGHGEYLIHGTNANFGIGMRVSSGCIRLRPDDIEALFNSVPKGTRVQIINEPVK
VSVEPDGKRYAEVHQPLSKVESDDPQTMPISLSKSQQKFADSAETDKSVFDSAITRRSGM
PVLVSVGQNPADVPLPSVQLFGGSKQAETQAAPISQAQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcgttgactttaatgggcgtactattcgcctccgtgttggccggcagtcag
gccgctaatgcgaccgaatatccattgccgccggcgaacagccgtctgatcggcgagaat
accacctacaccgtaccggatgccggcctttcgctggaggcgattgccgccaaataccag
attggcctgctgggcatgctggaggccaaccccggcaccgatccttacctgccgaagccg
ggcaaagtgctgaccattccgacgcagatgctgctgccggataccaagcgcgagggcatt
gtggtcaatctggcggagctgcgtctgtattattacccgaaaggcgaagacaaggtgatc
gtctacccgatcggcatcggtcagaccgggatgcacacgccgctgaaagttacctcggtc
agccagaagatccctaacccgacctggacgccgaccgccaatatccgcaaacgttatgcg
gcgaaaggcgagacgctgccggcggtggtgccggccggtccgaataacccgatggggctg
ttcgccatgcgcctgtcgatggggcatggggagtatctgatccacggcaccaacgccaac
ttcggcatcggcatgcgcgtcagctccggctgtatccgcctgcgccctgacgatatcgaa
gcgctgttcaacagcgtgccgaagggcacccgcgtgcagattatcaacgagccggtgaag
gtatcggttgagccggacggcaaacgctatgcggaagtgcatcagccgctgtcgaaagtt
gaaagcgacgatccgcagaccatgccgatttcgctctctaagtcgcagcagaagtttgcc
gatagcgcagaaacggataagtcggtgtttgacagcgccataacgcgccgctccggcatg
ccggtgctggtcagcgtcgggcagaaccctgcagacgtccctctgccgtcggtacagctg
tttggcggcagtaagcaggccgagacacaggcagcgccgatcagccaggcacagtag
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