Serratia sp. Tan611: TAN611_3613
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Entry
TAN611_3613 CDS
T10950
Symbol
yfhA
Name
(GenBank) putative DNA-binding response regulator in two-component system
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
sert Serratia sp. Tan611
Pathway
sert02020
Two-component system
sert02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TAN611_3613 (yfhA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TAN611_3613 (yfhA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sert02022
]
TAN611_3613 (yfhA)
Two-component system [BR:
sert02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
TAN611_3613 (yfhA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
AAA_5
AAA_16
AAA_2
AAA
HTH_8
AAA_3
AAA_7
nSTAND6
OKR_DC_1_N
MCM
PDE8A_N
DUF7317
UPF0175
TIP49
Motif
Other DBs
NCBI-ProteinID:
CAE1149008
LinkDB
All DBs
Position
Tan611:complement(3729962..3731299)
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AA seq
445 aa
AA seq
DB search
MTARKAANLLLVDDDPSLLKLLGMRLTSEGFHVTTAESGQEALRLLAREQIDLVISDLRM
DEMDGMALFAEIQKRQPGMPVIILTAHGSIPDAVAATQQGVFSFLTKPVDRDALYKAIDE
ALSLSAPAGDDSWREDIVTRSPAMLRLLEQANMVAQSDVSVLINGQSGTGKEVLAQAIHR
ASPRAKKAFIAINCGALPEQLLESELFGHAKGAFTGAVSNREGLFQAAAGGTLFLDEIGD
MPLSLQVKLLRVLQERKVRPLGSNRDLDIDVRIISATHRDLPKAMAKNEFREDLYYRLNV
VNLKIPALNERAEDIPLLANHLLRESAKRHKPFVRSFSTDAMKRLMTASWPGNVRQLVNV
IEQCVALTSAPVIGEALVEQALEGENTALPTFAEARNQFELHYLRKLLQITKGNVTQAAR
MAGRNRTEFYKLLSRHELDANDFKE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgacagcacgtaaagcggccaatttacttctggttgatgacgatcccagcctgctgaag
ctgctgggcatgcgcctgaccagcgaaggttttcacgttacgaccgccgaaagcggacag
gaagcgctgcgcctgctggcgcgcgagcagatcgatctggtgatcagcgatctgcgcatg
gatgagatggacggcatggcgctgtttgcggaaatccaaaagcgtcagcccggcatgccg
gtgattattctgaccgcgcacggctccattccggacgccgtggcggcgacccagcagggg
gtattcagcttcctgaccaaaccggtcgatcgcgatgcgttatacaaggcgattgacgaa
gcgctgtcgctgtcggcgccggcgggcgatgatagctggcgtgaggatatcgtcacccgc
agcccggcgatgctgcgtctgctggagcaggcgaacatggtggcgcagtcggacgtcagc
gtactgattaacggccaaagcggcaccggtaaagaggtgctggcgcaggcgatccaccgc
gccagcccgcgcgccaagaaagcctttatcgccattaactgcggcgcgctgccggaacag
ctgctggagtctgagctgttcggccatgccaaaggcgcctttaccggcgcggtcagcaac
cgcgaggggttgttccaggcggcggcgggcggcacgctgttcctcgatgaaatcggcgat
atgccgctgtcgctgcaggttaaactgctgcgcgtgctgcaggagcgcaaggtgcgtccg
ctgggcagcaaccgcgatctggatatcgacgtgcgcattatctcggcgacccaccgtgac
ctgccgaaggcgatggcgaaaaacgaattccgtgaggatttgtactaccgcctgaacgtg
gtgaacctgaagatcccggcgctgaacgagcgcgccgaggatattccgctgctggccaat
cacctgctgcgtgaatcggccaagcggcataaaccctttgtgcgcagtttctccaccgat
gcgatgaagcgtctgatgaccgccagctggccgggcaacgtgcgtcagctggtgaacgtg
atcgaacagtgcgtggcgctgacctcggcgccggtgatcggcgaggcgctggttgagcag
gcgctggagggcgaaaacaccgcgctgccgacctttgccgaggcgcgcaaccagtttgag
ctgcattacctgcgcaaactgctgcagattaccaagggcaatgtgacacaggcggcgcgt
atggcgggccgtaaccgtaccgaattttataagttgctgtcgcgccacgaactggacgcc
aacgactttaaagaatga
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