Serratia sp. Tan611: TAN611_3729
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Entry
TAN611_3729 CDS
T10950
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sert Serratia sp. Tan611
Pathway
sert03030
DNA replication
sert03430
Mismatch repair
sert03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TAN611_3729 (dnaE)
03430 Mismatch repair
TAN611_3729 (dnaE)
03440 Homologous recombination
TAN611_3729 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sert03032
]
TAN611_3729 (dnaE)
03400 DNA repair and recombination proteins [BR:
sert03400
]
TAN611_3729 (dnaE)
Enzymes [BR:
sert01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TAN611_3729 (dnaE)
DNA replication proteins [BR:
sert03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TAN611_3729 (dnaE)
DNA repair and recombination proteins [BR:
sert03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TAN611_3729 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
CAE1149278
LinkDB
All DBs
Position
Tan611:complement(3842388..3845876)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKTGPLVKRAAALTMPALAITDFTNLCGLVKFYGTAHGA
GVKPIIGADFHVQSDVLGDELAELTVLAANNTGYQNLTLLISRAYQRGYGAAGPIIDRDW
LIEYREGLILLSGARMGDVGKFMLRGNQAQVDQCLDFYQQYFPDSYYLELIRTGRPDEEN
YLHAAVALAAERGLPVVATNDVRFLVEDDFDAHEIRVAIHDGFTLDDPKRPRNYSAQQYM
RSEDEMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGEMTTEDFLVAKSKEGL
EERLEFLYPDPEVRAQRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDRVIEHVAD
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKSGEEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEDGAKSIGVDGELSMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAILEARNSGEQGYFKDLFDLCARSDIKKLNRRILEKLIMSGAFDRLGPHRAAL
MNSLPDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYANVAPWQEQVVLDGERETLG
LYLTGHPITQYLKEIERYAGGLRLKDMHPTDRGKMTTAVGLVVAARVMVTKRGNRIGICT
LDDRSGRLEVMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTARELMDISEARE
KYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRVDARAKLRFGATWRVTP
TDRLLIDLRTLVGNEQVELEFD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcacctgcgcgttcacagcgactactccatgatagatgga
ctcgccaagaccggcccgttggtgaagagggccgcggcgcttaccatgccggcgctggcc
atcaccgactttaccaacctgtgcggcctggtgaaattttatggcacggcgcacggcgcc
ggggtaaagccgatcatcggcgcagatttccacgtacagagcgacgtgctgggcgatgag
ctggccgagctgacggtactggcggcgaacaacaccggctatcaaaacctgacgctgctg
atttcccgtgcttaccagcgcggctacggcgcggcagggccgattatcgaccgcgactgg
ctgattgaataccgcgaagggctgattctgctgtccggcgccagaatgggcgacgtgggc
aaatttatgctgcgcggcaaccaggcgcaggtcgatcagtgtctggatttttatcaacaa
tacttccccgacagttactacctggagctgatccgcaccggacgcccggacgaggagaac
tacctgcacgcggcggtggcgttggcggctgaacgcggcctgccggtggtggccaccaac
gacgtacgcttcctggtagaagacgattttgacgcgcatgaaattcgcgtcgctatccat
gacggctttaccctcgacgatcccaaacgcccgcgcaactatagcgcgcagcagtatatg
cgcagcgaagatgagatgtgcgagctgtttgccgatattcctgaggcgctgatcaacagc
gttgaaatcgccaagcgctgcaacgtcaccatccgtctgggcgaatatttcctgccgcag
ttcccgaccggtgagatgaccaccgaagacttcctggtcgccaagtcgaaagaggggctg
gaagagcgcctcgagtttctgtacccggatccggaggttcgcgcccagcgacgccctgaa
tatgatgagcgtctggatatcgagctgaaggtcatcaaccagatgggtttccccggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacgatgtgccggtagggccg
ggacgtggctctggtgccggctcactggtggcctacgcgctgaaaatcaccgatctggat
ccgctggagttcgatctgctgttcgaacgtttccttaacccggaacgtgtctcgatgccc
gacttcgatgtcgacttctgcatggaaaaacgcgaccgggtgatcgagcacgtggcggac
atgtacggccgcgaggcggtatcgcagattattaccttcggcaccatggcggcgaaagcg
gtaatccgcgacgtgggccgcgtgctggggcatccgtatggcttcgttgaccgtatctcc
aagctggtgccgcctgacccgggcatgacgctggagaaagcctttgccgccgagccgcag
ctgccggaaatctatgaggcggatgaagaggtcaaagcgctgatcgatatggcgcgcaag
ctggaaggcgtcacccgtaacgccggtaaacacgccgggggcgtggtgatcgcgccgacc
aagattaccgacttcgcgccgctgtactgcgacgccgaagggcatcacccggtgacgcag
ttcgacaagaacgatgtggaatacgccggtctggtgaagtttgacttcctggggctgcgt
actctgaccatcatcgactgggcgctggagatgatcaacgcccggcgcgccaaaagtggc
gaggagccgatagatatcgcggcgatcccgctcgatgacaagaaaagtttcgatatgctg
cagcgctcggaaaccacggcggtattccagcttgaatcgcgcggcatgaaagacctgatc
aaacgcctgaagcccgactgtttcgaagatatgatcgcactggtggcgctgttccgcccg
gggccgctgcagtccggcatggtagataactttatcgaccgtaagcacggtcgtgaagag
atctcctacccggatatccagtggcagcatgaatcgcttaaaccggtgctggagccgacc
tacggcattatcctgtatcaggaacaggtgatgcagattgcccaggtgctggccggctat
acgctgggcggcgcggatatgctgcgccgtgcaatgggtaagaaaaagccggaagagatg
gcgaaacagcgctcggtgtttgaagatggcgcgaagagcatcggcgtcgacggcgaactg
tcgatgaaaatctttgacctggtggagaaattcgccggttacggctttaacaaatcccac
tctgccgcctatgcgctggtatcctaccagacgctgtggctgaaagcgcattatccggcc
gagtttatggcggcggtgatgaccgccgatatggacaacaccgataaggtggtcggcctg
gtggacgaatgctggcgcatggggctgaagatcctgccgccggacatcaacagcggcctg
tatcacttccacgtcaatgatgacggcgagatcgtttacggtatcggcgcgattaaaggc
gtgggtgaagggccgattgaggctattcttgaagcacgcaacagcggcgagcagggctat
tttaaagatctgtttgacctgtgcgcgcgctcggatatcaaaaagcttaaccggcgtatt
ctggaaaagctgattatgtccggcgcattcgaccggttggggccgcaccgcgccgcgctg
atgaactcgctgcctgatgcattgaaagcggcggaccagcatgccaaggccgaggctatc
ggccaggtggatatgtttggcgtactggcggaagcgccggaacaggtggaacagtcctac
gccaacgtggcgccgtggcaggagcaggtggtgctggacggtgagcgggaaacgctgggg
ctgtatttgaccggccacccgattacccagtacctgaaggagatcgaacgctacgccggc
ggcctgcgtttgaaagatatgcacccgacggatcggggcaaaatgactaccgccgtcggg
ctggtggtcgctgcgcgcgtgatggtcaccaagcgcggcaatcgtatcggtatttgcacc
ctggatgaccgttccggacgcctggaggtgatgttatttaccgacgcgttagaaaaatac
cagcatttgttggaaaaagaccgtatcctgattgccagtggacaggtcagctttgatgac
tttagcggtgggcttaaaatgaccgcccgcgagctaatggacatcagtgaagcccgtgaa
aaatatgctcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttg
aaccgtctccgccagtcgttggaaccccatcgatcggggacgattccagtgcatctgtac
tatcaacgggtcgacgctcgtgccaagctgcgttttggcgcaacctggcgagtgacgccc
acggaccgcttgttgatagacttacggactttggtaggtaatgagcaggtggaactggaa
tttgactaa
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