Serratia sp. Tan611: TAN611_4066
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Entry
TAN611_4066 CDS
T10950
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein gabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
sert Serratia sp. Tan611
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sert03000
]
TAN611_4066 (gabR)
Transcription factors [BR:
sert03000
]
Prokaryotic type
Helix-turn-helix
GntR family
TAN611_4066 (gabR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_24
Motif
Other DBs
NCBI-ProteinID:
CAE1150041
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Position
Tan611:complement(4196056..4197468)
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AA seq
470 aa
AA seq
DB search
MDIQQLRPDQQHDAPLYLQLYRRYREAIAAGKLRPGDRVPSVRSLASELNLARGTVETAY
QMLANEGYFVARGAAGTVVSPGLGTLAEPLAVTAPPVVASPHPHAVTGDSLSFQMGLPAL
DAFPRKVWARLAGRSLRSREMQAMYYPDPAGYAPLRQAIAAYLGISRGIACTHEQVFVTA
GYHGALELVRHTLLQAGDVGWFEDPGYLFARQYLERAGLRLAAVPVDAEGLNVAAGRLRS
DDARFAVVTPTHQSPTGVALSLPRRLELLEWARRRQAWIIEDDYDSEFRYHGRPLPALKS
LDRDGRVLYTGTFSKVLFPGLRLAYLVAPAGLVSRFRDSVNHLPGPGSILPQAMVADFME
QGHFGRHLRKMRALYAARRGYLVGALRQTLGERLHIQPQAGGIHVLAHLPAGQDDKALVA
AAESAGLGLQALSDWRATPSEAGGLLMGFANFATAAEAETAVRRLKAVMV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggatatacagcagttgcggcctgaccagcagcatgatgcaccgctctacctgcagctg
taccggcgctaccgcgaggcgattgccgccggcaagctgcgcccgggggaccgcgtgccg
tcggtgcgcagcctcgccagcgaactgaatctggcgcgcggcacggtggaaaccgcctac
cagatgttggcgaacgagggctatttcgtcgcacgcggcgcggccggcaccgtagtgtcg
ccggggctggggacgctggccgaaccgctggcggtcactgcaccgccggttgtcgcttcg
cctcatccgcatgccgtcaccggcgattcgctgtcgttccagatggggctgccggcgttg
gacgcgtttccgcgcaaagtctgggcccgtctggcggggcgcagcctgcgttcgcgggag
atgcaggcgatgtattaccccgatccggcgggctatgcgccgctgcggcaggctattgcc
gcctatctgggtatctcgcgcggcattgcctgcacgcatgaacaggtgtttgttaccgca
ggctatcacggggcgctggagctggtgcgccatacattgctgcaggcgggcgacgtcggc
tggtttgaggaccccggttacctgtttgcccggcagtatctggagcgcgccggtctgagg
ctggcggcggtgccggtggatgcggaggggctgaacgtggccgccggccggctgcgctcg
gatgacgcgcgtttcgcggtggtaacgccgactcaccaaagcccgacgggcgtggcgctg
tcgctgccgcggcggttggaattgctggaatgggcgcgccgccgccaggcgtggattatt
gaagacgactacgacagcgagttccgctaccacggtcggccgctgccggcgttgaaaagc
ctggatcgcgacgggcgcgtgctttataccggcaccttcagcaaagtgttgttccccggc
ctgcggctggcgtatctggtggcgcctgccgggctggtcagccgctttcgggacagcgtc
aaccatctgcccggccccggctccattctgccgcaggcaatggtggccgactttatggaa
caggggcactttggccgccatctgcgcaagatgcgtgcgctgtacgccgcacggcgcggc
tatctggtgggtgccctgcggcagacgctgggcgagcggctgcatatccagccgcaggcc
ggcggtatccacgtgttggcgcatctgccggccggacaggatgataaggcgttggttgcc
gctgccgagtcagccgggctggggctgcaggcgctgagtgactggcgggccacgccttcc
gaagcgggcgggttgctgatggggtttgccaattttgccacggcggcagaggcagagacg
gcggtgcggcgtcttaaggcggtgatggtgtag
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