Serratia sp. Tan611: TAN611_4209
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Entry
TAN611_4209 CDS
T10950
Symbol
ygjF
Name
(GenBank) G/U mismatch-specific DNA glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
sert Serratia sp. Tan611
Pathway
sert03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
TAN611_4209 (ygjF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sert03400
]
TAN611_4209 (ygjF)
Enzymes [BR:
sert01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
TAN611_4209 (ygjF)
DNA repair and recombination proteins [BR:
sert03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
TAN611_4209 (ygjF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAE1150442
UniProt:
A0A7S4H634
LinkDB
All DBs
Position
Tan611:complement(4344007..4344501)
Genome browser
AA seq
164 aa
AA seq
DB search
MELLAPHLRVVFCGINPGLSSAHRGYPFANASNRFWKVIHLAGFTARQLAPEEWQQLQEY
GCGITALVARPTVAASELAREELRHGGEALSDKILRCQPRALAILGKQAFSDAFGIRKVS
WGRQALMIGDTEVWVLPNPSGLNRATLESLTDSYRQLASALENR
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggaacttctggcgccccatctgcgggtggtgttttgtggcatcaatcccggcctttct
tccgcccaccgcggctatccgtttgccaatgccagcaaccgtttctggaaggtgattcat
ctggcggggtttaccgcccgccagctggcgccggaggagtggcagcagctgcaggaatac
ggctgcggcattacggcgctggttgcgcgtccgacggtggcggccagcgagttggcgcgt
gaggaactgcgccatggcggtgaggcgttaagcgataaaattctgcgctgtcagccgcgc
gcactggcgattctcggcaaacaggcgttcagcgatgccttcggcatccgcaaggtgagc
tgggggcgacaggcgctgatgattggcgataccgaggtgtgggtgctgcctaatcccagc
gggcttaaccgtgcgacgctggagtcgctgacggacagctatcgtcagctggcgtcggcg
ttggaaaacagataa
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