Serratia sp. Tan611: TAN611_4296
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Entry
TAN611_4296 CDS
T10950
Symbol
rpoN
Name
(GenBank) RNA polymerase, sigma 54 (sigma N) factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
sert Serratia sp. Tan611
Pathway
sert02020
Two-component system
sert02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sert00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TAN611_4296 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
TAN611_4296 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sert03021
]
TAN611_4296 (rpoN)
Transcription machinery [BR:
sert03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TAN611_4296 (rpoN)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CAE1150615
LinkDB
All DBs
Position
Tan611:4429407..4430840
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AA seq
477 aa
AA seq
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MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDPHDEIDAEE
GNDTEGLDTREALEQKEMPDELPLDATWDEIYTAGTPSGTGTDYRDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTVSLEEILESVGAEDVTLDEVEAVLK
RVQRFDPIGVAARDLRDCLLVQLSQYAKETPFLTEARLIISEHLDLLANHDFRSLMRSTR
LKEDTLKEAMLLIQSLDPRPGQSINTGESEYVIPDVLVRKVHNRWTVELNADSIPRLKIN
QHYAALGNSSRNEADGQFIRSNLQEAKWLIKSLESRNDTLLKVTRCIVEQQEAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATLLADQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggctcagccaacaattggcgatgactccccagctgcaa
caggccattcgtctgctgcagctgtctacgcttgagctccagcaagagatccaactggcg
ttagagagcaacccgctgcttgagcaaaccgacccgcacgatgagatcgacgcggaagag
ggcaacgacaccgaaggtctggatacccgcgaggcgctggagcaaaaggagatgccggac
gagctgccgctggacgccacctgggacgaaatctataccgccggcacgccatcgggcacc
ggcaccgattaccgcgacgatgagctgccggtctatcagggggaaaccacccagacgctg
caggactacctgatgtggcaggtggatctgaccccgttctccgataccgacgccgctatc
gccacctcgatcgtcgacgccgtcgacgataccggctatctcaccgtctcgctggaagag
attctggaaagcgtcggcgcggaagacgtcacgcttgatgaggtggaagcggtactcaaa
cgggtgcagcgtttcgacccgatcggcgtcgcggcgcgcgacctgcgcgactgtctgctg
gttcagctttctcaatacgccaaagagacgcctttcctcaccgaagcccggctgatcatc
agcgaacacctggatctgctggccaatcacgactttcgcagcctgatgcgatcaacccgg
ctaaaagaagatacactgaaagaagcgatgctgctgattcagtcgctcgacccgcgcccg
gggcaatcgatcaataccggcgagtcggaatatgtcattcccgacgtgctggtacgcaag
gtgcacaaccgctggacggtcgagctgaatgccgacagcattccgcgtctgaagatcaac
caacactacgccgcactgggcaacagctcgcgtaatgaagccgatggccagtttatccgc
agtaacctgcaggaagcgaaatggctgatcaaaagcctggaaagccgtaacgatacgctg
ctgaaggtgacgcgctgtatcgtcgagcagcaggaggcgttctttgaacaaggcgaggag
tttatgaagcccatggtgctggcggatatcgcccaggccgtggagatgcatgaatcgacg
atttcacgcgtgaccacgcagaagttcctgcacagcccgcgcggaatcttcgaactgaaa
tatttcttctccagccacgtcaacaccgacagcggcggcgaggcatcctccacggcgatc
cgcgcgctggtgaagaaattgatcgcggcggaaaaccccgccaaaccgcttagcgacagt
aaactggccaccctgcttgccgatcagggcatcatggtggcgcggcgcaccgtcgccaag
taccgagagtctttgtccatcccgccgtcgaaccaacgtaaacagttggtttga
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