Serratia sp. UGAL515B_01: OK023_11080
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Entry
OK023_11080 CDS
T11539
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
seru Serratia sp. UGAL515B_01
Pathway
seru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
seru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OK023_11080 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seru03000
]
OK023_11080 (alkA)
03400 DNA repair and recombination proteins [BR:
seru03400
]
OK023_11080 (alkA)
Enzymes [BR:
seru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
OK023_11080 (alkA)
Transcription factors [BR:
seru03000
]
Prokaryotic type
Helix-turn-helix
AraC family
OK023_11080 (alkA)
DNA repair and recombination proteins [BR:
seru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
OK023_11080 (alkA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WON75818
LinkDB
All DBs
Position
complement(2466922..2468430)
Genome browser
AA seq
502 aa
AA seq
DB search
MKKKPTQSDTMNNQNQALYAALSARDRKFDGRFFVGVSSTGIYCRPVCSARTPKIENCTF
YPSAAAAELAGFRPCLKCRPELAPGLALIDLGNRYAQVAVQLIEQGYLSEYSCEQLATRL
GISDRHLRRIFAEQFGASPIDYAQSHRLLQAKRLLVDTDLPLSEVAFAAGFRSLRRFNEL
FKARYRLIPSVLRSTAGRHEQATHGGLVFHLGYRPPYDWPRMLGFLQARAVSGVESVVDQ
QYQRSIAVNQGGIEYRGWVSVQPEASHNRVRVEISASLSRVTTEVLRRIRQLFDLDAAPD
HIVDTLGELAAGTPGLRLPGCVNSFEQAARAVLGQLVSVKMAATFAARMTERWGTTLEQP
YGHVTHLFPDAACVAQLQPEELRLAGVQLKRAAALIGIARAMTEGRLQLDNVLDIGQGIQ
DLTSLAGIGSWTANYIAMRAWSWPDVFLSGDYLIKQRFPGMTPRQIERYAERWRPWRSYA
TLHLWHNDRWVPSSDTKVTTIE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaaaccgacgcagagcgataccatgaataatcaaaaccaagcgctatatgct
gcgctgagcgcgcgtgaccgtaaatttgatgggcgtttttttgtcggcgtttcctctacc
ggtatttattgccggcctgtatgtagcgcccgtacacccaaaatcgaaaactgtaccttc
taccccagcgctgcagctgccgaattagctggtttccggccttgtttgaagtgccgccca
gaattggcaccgggattggcacttatcgatctgggtaatcgttacgcccaggtagccgtg
cagttgattgagcagggctatttgtcagaatatagctgtgaacagcttgcaacccggtta
ggtatttccgatcgtcatctgcggcgcatttttgccgagcaatttggcgcctcgcctatt
gattacgcccagtcacatcggttgttacaagccaagcgcctgttggttgacacggatttg
ccactgagtgaggtggcatttgctgccggttttcgcagcctgcgtcgtttcaatgaactg
tttaaggcccgttatcgtttgattccttcggtgttgcgcagcacggcagggcggcatgag
caggccacccatgggggattggtttttcatctagggtatcggcctccctacgattggcca
cgtatgctcggctttttacaggcccgtgctgtcagcggcgtcgaaagtgtggttgatcag
caatatcagcgttcaattgccgttaatcaaggagggattgagtatcgcggttgggtcagt
gtgcagccggaggcgtcacataaccgggtgcgcgtcgagatttccgcctcgttaagccgg
gtcacgaccgaagtcttacgccgcattcgtcaattatttgatctggatgccgctcctgac
cacattgttgatacgttaggagagctggccgcagggacacctggtttaaggttgccaggc
tgtgttaacagctttgaacaggctgcaagggcagtgttggggcaactggtcagtgtcaaa
atggcggcgacctttgcagctcggatgaccgaacgttggggaacgactctggagcagcct
tatggtcacgttactcacttgtttcccgatgcggcgtgtgtggcacagctgcaacctgaa
gaactacgtttagctggggtccaactaaaacgcgccgccgcattgattggcattgcgcga
gcaatgacggaaggacgtttgcagttggataacgtgctagatattgggcagggtattcag
gacttgacctccctggcgggtattggcagttggacggctaactacatcgcgatgcgagcc
tggtcgtggccggacgttttcttgtcaggcgattatcttatcaaacagcgttttcccgga
atgaccccacgtcaaattgaacgttatgccgaacgttggcggccatggcgttcttacgcc
actctacatctttggcacaacgatcgctgggttccttcatcggataccaaagtaaccact
atcgagtaa
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