Serratia sp. UGAL515B_01: OK023_16830
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Entry
OK023_16830 CDS
T11539
Symbol
hdfR
Name
(GenBank) HTH-type transcriptional regulator HdfR
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
seru Serratia sp. UGAL515B_01
Brite
KEGG Orthology (KO) [BR:
seru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
seru03000
]
OK023_16830 (hdfR)
Transcription factors [BR:
seru03000
]
Prokaryotic type
Helix-turn-helix
LysR family
OK023_16830 (hdfR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
WON76829
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Position
3727958..3728785
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AA seq
275 aa
AA seq
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MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGASLFTRHRNNIRLTPA
GERLLPYAENLMHTWQLAKKDVVRSLQHTEFSIGATASLWEAYLTTWLQSLYQYRESLQV
EARVALRHSLVKQLHERQLDLLITTEPPKMDELASQALGNFSLRLFSSALRDKQAPMPYV
KLEWGADFHTHENSMLENDNMPVLTTTSAHLTRQLLETTGGCAFLPCQWEKEYPQLSAVA
DVQPIIRPLYAVWLQNSDQQQLIRELLKMPLNTSI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtggataccgaattactgaaaacctttttggaggtcagtaggacacgtcactttggcaga
gcagcggaatcactgtacttaacgcaatctgcggtaagtttccgcatccgacaacttgaa
aatcaactaggtgcaagtttattcacccgtcaccgcaataatattcgtctgacaccggcg
ggagaacgtttgttaccctatgcagaaaacttgatgcatacctggcagttggcaaaaaaa
gacgtggtacgctcgctgcaacataccgaattttcaattggtgctacggcctcgctatgg
gaagcttacctgacaacctggttgcaatctctttaccagtaccgagaatcactgcaagtt
gaggcgagggttgcgttacgtcattcattggtgaaacagttgcatgaaaggcagctcgac
ttgctcattaccacagagccaccaaagatggatgagctggcaagccaagctttgggtaac
ttttctttgcgattgttttcctctgcattacgcgataaacaagcgcccatgccttatgtc
aaactagaatggggagcagactttcacacacatgaaaacagcatgttagaaaacgataac
atgccagtattgactaccacttcggcacacctaactcgccaattgctcgaaacaactggc
ggctgtgcttttcttccctgccaatgggaaaaagaatatccacaattgagcgctgtcgca
gatgtacaacccatcattcgccctctgtatgcagtctggctgcaaaacagcgatcaacaa
caattaatccgagaactgctaaaaatgcctttaaacacctctatatga
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