Serratia sp. JSRIV001: KGP17_00790
Help
Entry
KGP17_00790 CDS
T11585
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
serv Serratia sp. JSRIV001
Pathway
serv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KGP17_00790 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
serv03021
]
KGP17_00790 (rho)
03019 Messenger RNA biogenesis [BR:
serv03019
]
KGP17_00790 (rho)
Transcription machinery [BR:
serv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KGP17_00790 (rho)
Messenger RNA biogenesis [BR:
serv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KGP17_00790 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
OB_RNB
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
UAN46141
LinkDB
All DBs
Position
195879..197138
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARLRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSGDSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLAAPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLARKIAEKRVFPAIDY
NRSGTRKEELLTTSEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggcccgcctgcgcaaacaggacattatcttctctatactcaag
caacatgcgaaaagcggagaagatatcttcggtgatggcgtgctggagatattgcaggat
ggatttggtttcctccgttccggagacagttcctacctcgcaggccccgacgatatctac
gtttctcccagccaaatccgccgctttaacctccgcacaggtgacaccatttccggtaag
attcgtccgccaaaagaaggcgagcgctattttgccctgttgaaagttaacgaagtcaac
tacgacaaaccggaaaacgcccgtaacaagatcctgttcgaaaacctgacgccgctgcac
gccaactcacgtttgcgtatggagcgcggcaacggctctaccgaagatctgacggctcgc
gtactggatctggcagcgccaatcggccgtggccagcgtggcctgattgtggcaccgccg
aaagccggtaaaaccatgctgctgcaaaacattgcgcagagcattgcatacaaccatcca
gactgcgtgctgatggtgctgctgatcgacgaacgtccggaagaagtgaccgagatgcaa
cgtctggtaaaaggcgaagtgatcgcttctaccttcgacgaacccgcatcccgccacgta
caggttgccgaaatggtgatcgagaaggccaagcgcctggtcgaacacaaaaaagacgtg
atcatcctgctggactccatcacccgtctggcgcgtgcctacaacaccgtagtacctgcc
tcaggcaaagtgctgaccggtggtgtggacgccaacgccctgcatcgtccgaagcgcttc
ttcggtgcggctcgtaacgttgaggaaggcggcagcctgaccatcatcgctaccgcactg
gttgataccggttcgaagatggacgaagtgatttacgaagagtttaaaggtacgggtaac
atggaactgcatctggcgcgtaaaatcgccgagaagcgcgtgttccctgctatcgattac
aaccgttccggtacgcgtaaagaagagttgctcactacctctgaagaactgcagaagatg
tggatcctgcgcaagatcattcacccaatgggtgagatcgacgcgatggagttcctcatt
aacaagttggcgatgaccaaaaccaacgatgaattcttcgacatgatgaaacgctcataa
DBGET
integrated database retrieval system
