Serratia sp. JSRIV001: KGP17_00935
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Entry
KGP17_00935 CDS
T11585
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
serv Serratia sp. JSRIV001
Pathway
serv03420
Nucleotide excision repair
serv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
serv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KGP17_00935 (uvrD)
03430 Mismatch repair
KGP17_00935 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serv03400
]
KGP17_00935 (uvrD)
Enzymes [BR:
serv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KGP17_00935 (uvrD)
DNA repair and recombination proteins [BR:
serv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KGP17_00935 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
KGP17_00935 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
Viral_helicase1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UAN46165
LinkDB
All DBs
Position
225096..227258
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSMNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLAVENCSPYSIMAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRIVRALNIDEKQWPPRQAMWYINGKKDDGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNRIQYAWIHMLAGGK
ANVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETVRLEQNYRSTSTILKAANTLIANN
DGRMGKNLWTEGAEGEPISIYCAFNELDEARFVVNRIKAWQDNGSALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGMRFFERQEIKDALAYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQAARDRQLTLWQATRALLQDKVLAGRAASSLQRFLELVDSLAHETAEMPLHVQ
TDRVIRDSGLFIMYEQEKGEKGQARIENLEELVTATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFRQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGLTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGEIPEDCVEEVRLRASVSRSVSHRRMG
TPISENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQIAFQGEGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttccgacctgctcgacagcatgaatgataaacaacgtgaagccgtggctgcg
ccacgcagcaacctgttggtgctggccggtgcaggcagcggcaaaacccgggtgctggtg
catcgcattgcctggctactggcggtggagaactgctcgccgtactccatcatggcggtg
accttcaccaacaaggcggcggcagagatgcgccaccgtatcgaacacctgattggtacc
agccagggcggcatgtggatcggcaccttccacggcttggcacaccgcctgctgcgcgct
catcatatggatgccaacctgccgcaggacttccagatcctggatagtgaagaccagctg
cgcctcctgaaacgcatagtgcgggcgctgaacattgacgagaagcaatggccgccgcgc
caggcgatgtggtacatcaacggcaagaaagacgatggcctacgtccacagcatatcgaa
agctacggcaacccggtggaagccacctggttgcggatctatcaggcttatcaagaggct
tgcgatcgtgcagggctggtcgattttgccgaattgctgctgcgcgctcatgagctgtgg
ctgaacaaaccacatatcctcaatcattatcgtgagcgcttcaccaatatcctggtggac
gaattccaggacaccaaccgcatccagtacgcctggatccacatgctggccgggggtaag
gccaacgtaatgatcgtgggggatgatgaccagtcgatctacggctggcgtggtgcgcag
gtggaaaacatccagcgtttcctgaaggattttcccggtgcagaaacggtgcgtctggag
cagaactaccgttcgaccagcaccatcctgaaggctgccaacaccctgatcgccaataac
gacgggcgcatgggcaaaaacctgtggaccgaaggggccgaaggcgagccgatctcgatt
tactgtgcgttcaacgagctggatgaagcccgctttgtggttaaccgcatcaaggcctgg
caggacaacggcagcgcgctgaatgattgtgccatcctgtatcgcagcaacgcccaatcg
cgtgtgctggaagaggccttgttgcaaaccgccatgccataccgcatttacggcggcatg
cgcttcttcgaacgtcaggagatcaaggatgccctggcctatctgcggttgatcgccaac
cgtaacgatgatgcggcctttgagcgcgttgtgaataccccaacgcgcggcattggcgat
cgtaccctcgacgtagtgcgccaggcggcacgagaccgccaactgacgctgtggcaggct
acgcgtgcgctgctgcaagataaggtgctggcgggccgtgcagcgtcctccctgcagcgt
tttctggagctggtggactcactggcccacgaaaccgctgaaatgccgttgcatgtgcaa
accgaccgggtgatccgcgattccgggctgttcattatgtatgaacaggaaaagggcgag
aagggtcaggcgcgtatcgaaaaccttgaggaactggtcacggccacgcggcaatacagc
taccaggatgaagatcaggatctgatgccgttgcaggccttcctgtcccatgccgcgctg
gaagcaggggaagggcaggcagatgcctatcaggacgcggtgcagctgatgaccctgcac
tcggccaaagggttggagttccgccaggtgtttatcgtcggcatggaagaggggatgttc
ccaagccagatgtcgctggacgaaggtggccgcctggaagaggagcgccgcctggcctat
gttggcctgacccgtgcaatgcaaaagctgacgctgacctatgcggaaacccgccgcctg
tatggtaaagaggtgtatcaccggccatcacgctttatcggtgagatcccggaagactgt
gtggaagaggtgcgcctgcgggccagcgtctcccgctcggtaagccaccgccggatgggg
acgccgatcagtgaaaacgacactggttacaagcttggacagcgcgtgcgccatgccaaa
tttggtgagggcaccatcgtcaacctggaaggcagcggtgaacacagccggttgcagatc
gcgtttcagggtgaaggcatcaagtggctggtagccgcctacgccaagctggaaacggtg
taa
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