Serratia sp. JSRIV001: KGP17_02445
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Entry
KGP17_02445 CDS
T11585
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
serv Serratia sp. JSRIV001
Pathway
serv00330
Arginine and proline metabolism
serv00480
Glutathione metabolism
serv01100
Metabolic pathways
serv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
serv00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
KGP17_02445 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
KGP17_02445 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
KGP17_02445 (speF)
Enzymes [BR:
serv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
KGP17_02445 (speF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UAN46436
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All DBs
Position
complement(552949..555111)
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AA seq
720 aa
AA seq
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MNKLKIAANPKTLSCFETTREISDVHHSDFNDVAAIVLSVEDVQQGLVAQLEETGLHIPI
FVAVCCEEELDNAVLPALNGVFELCGKNTQFYGKQLEAAAVKYESELLPPFFNTLTQYVE
MGNATFACPGHQGGEFFRKHPAGRQFFDFYGETLFRSDMCNADVKLGDLLIHEGAPCDAQ
KHAAKVFNADKTYFVLNGTSASNKVVTNALLSRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFEEGYLRQQIRETAPERANDARPFRLAIIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLELNENDPGIIVTQSVHKQQAGF
SQTSQIHKKDKHIKGQDRYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGKSGQRL
WKECVRIGIESRKMLLDTCTMIKPFVPEQIDGKPWQSYSTEAMANDLRFFNFIPGEKWHA
FEGYEESQYFVDPCKLLLTTPGIDTASGEYSSFGIPATILANYLRENGIVPEKCDLNSIL
FLLTPAEDIAKMQHLVALIARFEKHVEQDSLLSEVLPTVYKNNEKRYRNYTLRQLCQEMH
DLYVSYNVKELQKEMFRKSHFPRVAMDPQTANTEFVRGKVELVTLAKAEGRIAAEGALPY
PPGVLCVVPGEIWGGSAQRYFLALEEGINLLPGFAPELQGVYIQQDEDGWNRAYGYVMKA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactaaaaattgcagcgaacccaaaaactctctcttgctttgaaaccacacgt
gaaattagcgatgtgcaccacagcgactttaatgacgtagccgccatcgtgctttccgtg
gaagacgtacagcaaggcctggtggcacagttggaagaaaccggtttacacattccgatc
tttgtcgccgtctgctgtgaagaagaactggataacgccgtattaccggcgctgaacggc
gtatttgaactctgtggcaagaacactcagttctacggcaagcaactggaagccgcagcg
gtaaaatatgaaagcgagctgctaccaccgttctttaataccctgacccaatatgtagag
atgggtaacgctaccttcgcctgcccaggacatcagggcggtgagttcttccgcaagcac
cccgcaggccgccagttctttgatttctatggtgaaacgctgttccgctccgatatgtgc
aacgccgacgttaagctgggcgatctgctgatccacgaaggcgcgccttgcgatgcacaa
aaacacgccgccaaggtgttcaacgccgataaaacctatttcgtgctgaacgggacttcg
gcttccaataaagtggtaaccaacgccctgctgagccgtggcgatctggtcctgttcgac
cgtaacaaccataagtccaaccaccatggcgcgctgatccaggccggggcaacgccggta
tatctggaaacggcacgtaacccgttcggctttatcggcggcatcgatgctcactgcttt
gaagaaggctatctgcgccagcaaatccgcgagaccgcaccggaacgcgccaacgacgcg
cggccattccgcctggcgattatccaactggggacttacgacggcacgatctataacgct
cgccaggtagtagacaagattgggcacctgtgtgattacatcctgtttgactctgcatgg
gtcggctatgagcagttcatcccaatgatgaaagactgctcgccgctgctgctggaactg
aacgaaaacgatccggggatcatcgttacccagtcggtacataaacagcaggccggtttc
tcacagacctcgcagatccataaaaaagacaagcacatcaaagggcaagatcgttactgc
aaccataagcgtttcaataacgcctttatgctgcacgcgtccaccagcccgttctacccg
ctgtttgccgcactggatgtgaacgctaaaatgcatgaaggcaagagcggccaacgcctt
tggaaagagtgtgtgcgcatcggcattgagtcacgcaaaatgctgttggacacctgcacc
atgatcaaaccttttgtcccagagcaaatcgacggtaaaccttggcagtcctacagcacc
gaagccatggccaacgatctgcgcttcttcaactttatccctggcgaaaaatggcatgcc
ttcgagggttatgaggaatcacaatactttgtggatccctgcaagctgctgttgaccacg
ccgggcatcgataccgccagcggcgaatacagcagctttggtatcccggcgaccattctg
gctaactacctgcgtgaaaacggtattgtgccggagaaatgtgacctgaactctatcctg
ttcctgctcaccccggcggaagatatcgccaaaatgcagcatctggtggcgctgattgcc
cgcttcgaaaaacacgtcgaacaagactccttgctgagcgaagtcctgccaaccgtgtac
aagaacaacgaaaaacgttaccggaactacaccctgcgccagctgtgccaagagatgcac
gatctgtacgtcagctacaatgtgaaagaattgcagaaggaaatgttccgtaaaagccat
ttcccacgcgtcgccatggatccacaaaccgccaataccgaattcgtacgtggcaaggtg
gagctggttactctcgctaaagccgaaggccgcattgccgccgaaggtgcgttgccttac
ccaccgggcgtgctgtgcgtagtcccaggggaaatctgggggggatctgctcaacgctat
ttcctggcgttggaagaagggattaatttattacccggatttgctccagaattacaaggc
gtttatatccagcaggatgaagatggctggaaccgggcttacggttatgtcatgaaagca
taa
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