Serratia sp. JSRIV001: KGP17_07780
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Entry
KGP17_07780 CDS
T11585
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
serv Serratia sp. JSRIV001
Pathway
serv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
serv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KGP17_07780 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serv03400
]
KGP17_07780 (uvrB)
DNA repair and recombination proteins [BR:
serv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KGP17_07780 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KGP17_07780 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
SBDS_domain_II
Dynactin_p22
DUF87
Motif
Other DBs
NCBI-ProteinID:
UAN47413
LinkDB
All DBs
Position
1715663..1717675
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AA seq
670 aa
AA seq
DB search
MSKHFKLHSEFKPAGDQPQAIQKLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ
YTRNDQAFQRATFRVRGEVIDIFPAESDELALRVELFDEEVERLSLFDPLTGQIEQVVPR
FTIYPKSHYVTPRERIVQAMEEIKVELAQRRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGEGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMFKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFAAAAPQTIYVSATPGKYELEKSGGDIIDQVVRPTGLLD
PIVEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITDSMAKAIGETERRRAKQQAHNEANGIVPQGLNKKVADILQLG
QPSSRGKHKGKGKAAESAAQYQLLTPKALEQKIQELEAQMYSHAQNLEFEQAAAVRDEIH
QLREQFIALS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacatttcaaactgcattccgaattcaaaccggccggcgatcagccgcaagcc
atccaaaagttggaagaggggctggaagacggcctggcgcaccaaacgctgctgggggtt
accggctcgggtaaaacctttaccatcgccaatgtgatcgccgatctcaaccggcccacc
atggtgctggcgcccaacaagaccctggcggcccagctgtatggcgagatgaaagagttc
tttcccgagaatgcggtggaatattttgtctcctactacgattactaccaaccagaagcc
tatgtacctagctccgatacctttatcgagaaagacgcctcggtcaacgaacatatcgag
cagatgcgcctgtcggccaccaaagcgctgctagaacggcgtgacgtggtagtggtggct
tcggtttccgcgatctacggcctgggcgatccggatctgtacctgaaaatgatgttgcac
ctgaccaagggcatgatcatcgatcagcgttcgatcctgcgccgtctggccgagctgcaa
tatacccgcaacgatcaggccttccagcgcgccaccttccgcgtgcgtggcgaagtgatc
gacattttcccggcggaatcggatgagctggcgctgcgcgttgaactgttcgacgaagag
gtcgaacgcctgtcgctgttcgatccgctaaccggccagattgagcaggtggtgccacgc
tttaccatttatcccaaatctcactacgtcaccccgcgtgaacgtatcgtgcaggcgatg
gaagagatcaaggtggagttggctcagcggcgcaaagtgctgctggaaaacaacaagctg
ttggaagaacagcgcttgacgcagcgtacccagttcgatctggaaatgatgaacgagctg
ggttactgctccggtatcgaaaactactcgcgctatctttcagggcgcggtgagggcgag
ccaccgccaaccttgttcgactatctgccggctgacgggttgctggtggtagatgaatcc
cacgtcaccatcccgcagatcggcggcatgttcaaaggcgaccgctcgcgtaaagagacg
ctggtggaatatggcttccgcctgccttcggcgctggataaccggccaatgcgttttgaa
gagtttgccgctgcggcaccgcagaccatctacgtgtccgccacgccgggcaaatatgag
ctggagaaatccggcggcgatattatcgatcaggtggtgcgcccaaccggcctgctggat
ccgatcgtggaagtgcgcccggtgaccactcaggtggacgatctgctttccgagatccgc
aagcgcgtggctatcaacgagcgcgtactggtcaccacgttgaccaaacgcatggcagaa
gacctgacagaatacctggaagagcacggggagcgggtgcgttatctgcactcggacatc
gatacggtagaacgtgtcgaaatcatccgtgatttgcgtctgggcgagtttgacgtgctg
gtgggcatcaacctgttaagggaaggcctggacatgccagaggtgtcgctggtagcgatc
ctggacgcagacaaggaagggttcctgcgttctgagcgctcactgatccagaccattggc
cgagcggcgcgtaacctcaacggtaaagcgatcctgtatggcgacaggatcaccgattcc
atggccaaggcgatcggtgaaacggaacgccgccgcgccaagcagcaggcgcataacgaa
gccaacggtatcgtacctcagggcctgaacaagaaggttgcggatattctgcagcttggg
caaccaagcagccgtggcaagcacaaagggaagggcaaagcggcagagagcgcggcgcaa
taccaactgctcacccccaaagcgctggagcaaaaaatccaggagctggaggcacagatg
tattctcatgcgcagaatctggagttcgaacaggctgctgcggtgcgtgatgaaattcac
cagctgcgcgagcaatttatcgcgctatcataa
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integrated database retrieval system
