Serratia sp. JSRIV001: KGP17_09545
Help
Entry
KGP17_09545 CDS
T11585
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
serv Serratia sp. JSRIV001
Brite
KEGG Orthology (KO) [BR:
serv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
serv03009
]
KGP17_09545
Ribosome biogenesis [BR:
serv03009
]
Prokaryotic type
ribosomal protein modification factors
KGP17_09545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO
YcaO_C
Lipase_GDSL_3
Motif
Other DBs
NCBI-ProteinID:
UAN47742
LinkDB
All DBs
Position
complement(2106171..2107934)
Genome browser
AA seq
587 aa
AA seq
DB search
MTQTFIPGKDAALEDSIARFQQKLTDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGQQIAEGDFVHYPNEKWFPIPADNSLPQG
ILDERTHAFYDPEQELTASDLIDLQSGNSDRGICALPFTRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPSEVLNRYPDVVEAIAKLEAE
GFPILSYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRGLKDL
DVFTAPTFDDEEVAEHANLETHFIDSSGLISWDLFKQDADYPFVDWSFSGSTQEEFATLM
SIFNKEDAEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNSMGAHLRETLLQLPGS
EWEPEEYLALIQQLDDEGLDDFTRVRELLGIASGKDNAWYTLRVGELKSMLALAGGDLEQ
ALIWAEWTQEFNASLFTPERSNYYRCLQTLLLLALEPERDPAQYHTAFVKMYGQDAVDAA
SAAMSGEERFNGLFAIDSELKALPAHQALLAAYEKLQTAKRRHWAQA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacttttattcctggcaaagacgcggcactggaagactccatcgcacgtttt
cagcagaaattaaccgatctgggtttcaatatcgaagaagcctcctggctgaatccggtg
ccacacgtctggtcagtgcatatccgcgatcgcgattgcccgctgtgcttcaccaacggt
aaaggtgccagcaaaaaggccgcgctggcttccgcgctgggcgagtatttcgagcgcctg
tcgaccaactatttcttcgccgatttctatttgggccaacagattgccgaaggcgatttc
gttcactatcccaatgagaaatggttcccgatcccggctgacaactcactgccacaaggc
atcctggatgagcgcacgcacgctttctacgatccggagcaggaactgactgccagcgat
ctgatcgatctgcagtctggcaatagcgatcgtggcatctgcgccctgccattcacccgc
cagtcggatcagcagaccgtttatattccgatgaacatcatcggcaacctgtacgtgtcc
aacggcatgtccgctggcaataccgccaacgaagcgcgggttcagggcctctccgaggtg
ttcgagcgttatgtgaaaaaccgcatcatcgccgagtccatcagcctgccggaaatcccg
agcgaagtgctgaaccgctatcctgacgtggttgaggcgatcgccaagctggaagccgaa
ggtttcccgatcctctcttatgatgcttcgttaggcggcaactacccggtgatctgcgtg
gtgttgttcaaccctgccaacggcacctgctttgcctcctttggggctcaccctgatttc
ggggtcgcgctggagcgtacggttaccgagctgttgcaaggccgcggcttgaaagatctg
gatgtgtttaccgccccaaccttcgacgacgaggaagtcgccgagcacgccaacctggaa
actcacttcatcgattccagcggtttgatctcctgggatctgttcaaacaggatgccgac
tatccgtttgtcgactggagtttcagcggcagcacgcaggaagagttcgccaccctgatg
agcatctttaataaagaagatgccgaagtgtacatcgccgattacgagcacctggacgtg
tacgcctgccgtatcatcgtaccggggatgtccgacatctatccggcagaggatctgctg
ctggcaaacaacagcatgggcgcgcacctgcgtgaaaccctgctgcaactgccgggcagc
gagtgggagccggaagagtacctggctctgatccagcagttggatgatgaagggttggac
gatttcacccgcgtacgtgaattgctgggcattgcctctggtaaagacaacgcctggtac
accctgcgcgttggcgaactgaaatccatgctggcattggccggtggcgatctcgagcag
gcactgatctgggccgagtggacgcaggagttcaacgcctcactgtttaccccagagcgc
agtaactactatcgttgcctgcagacactgctgctgttggcgttggagccagaacgcgat
cctgctcaatatcacacggccttcgtgaagatgtatggtcaggatgcggttgacgctgcc
tctgcggccatgagcggtgaagagcgcttcaacggcctgtttgccatcgacagtgaattg
aaagccctgccggcccaccaagcgctgttggcggcttacgaaaagctgcaaactgccaaa
cgccgtcactgggcgcaggcataa
DBGET
integrated database retrieval system
