Serratia sp. JSRIV001: KGP17_21255
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Entry
KGP17_21255 CDS
T11585
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
serv Serratia sp. JSRIV001
Pathway
serv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KGP17_21255 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serv03400
]
KGP17_21255 (recD)
Enzymes [BR:
serv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KGP17_21255 (recD)
DNA repair and recombination proteins [BR:
serv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KGP17_21255 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_11
SH3_13
UvrD-helicase
AAA_22
PhoH
SLFN-g3_helicase
AAA_16
nSTAND3
T2SSE
CbiA
UvrD_C
AAA_28
Herpes_Helicase
Phageshock_PspD
FtsK_SpoIIIE
SRP54
Flavi_DEAD
TrwB_AAD_bind
AAA
AAA_17
NTPase_1
ATPase
Motif
Other DBs
NCBI-ProteinID:
UAN44929
LinkDB
All DBs
Position
complement(4598794..4600650)
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AA seq
618 aa
AA seq
DB search
MIEILHQALALGALRPLDVQFAQVVANDDEPDILLAAACLSSEAGAGHVCLLLEQLLPEN
LFGGRQPELALAAWQACGQPDVASWQQRLAVSPAISDGSTATPMVLQQQRLYLQRMWQSE
GDVATFISSDSVPQELEEAQLRTILDRLFGAATDEPDWQKIAAAVAATRRIAIISGGPGT
GKTTTVAKLLAALVQLAAGERLRIQLAAPTGKAAARLTESLGSASRQLDLTPEQRALFPT
EAATLHRLLGAQPNSQRMRYHRGNPLHLDVLIVDEASMVDLPMMARLIAALPPKARVIFL
GDRDQLASVEAGAVLGDICRFAEQGYSETRAAQLSRLTGCPFLQGQPAQAEAAVCDSLCL
LRKSYRFDAKSGIGQLALAVNAGDSKRALAALNGSYADVAGYPLAETEDYQRLLDNCVAG
YRDYLRLVAEGAGAVTILDAFGRFQLLCALREGPFGVAGLNERIESGLQRAGLIRRNPGP
AGRWYLGRPVMIGRNDSALGLFNGDIGIALPGEGGDLRVHFQLPDGSIKSVQPSRLPAHE
TAYAMTVHKSQGSEFDHTALVLPNHFLPVLTRELVYTAITRARQRLSLYAVDKVLISAIR
TPTQRRSGLAERLQIGRY
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgattgagattttgcatcaggcgttggctctgggcgccttgcgaccgctggacgttcaa
tttgcccaggtggtcgccaacgatgatgagccggatattctgctggccgccgcctgcctg
agctcggaggccggtgcgggccacgtttgtctgttgctcgaacaattattgccggaaaat
ctgtttggtggccgccagccagagttggccttggctgcctggcaggcctgcgggcaaccg
gacgtggcgagttggcaacagcgtctggcggtctcgccagcgattagcgatggcagtacg
gcaacgccgatggtactgcaacagcagcggctgtatctgcaacgcatgtggcagagcgaa
ggtgacgtcgccacttttatcagcagcgacagcgtgccacaggaacttgaagaagcgcag
ctgcgcaccatcctcgatcggttatttggcgcagccacggacgaacctgattggcaaaaa
attgccgcagcggtagcggccacgcgccgcatcgcgattatttccggcggccccggtact
ggtaaaaccacaaccgtcgccaagctgttggcggcgctggtgcagttggcggccggggag
cgtttgcgtatccagcttgctgcgcctaccggtaaagcagcggctcgactaaccgaatcc
ttgggaagcgctagccgtcagttggacttaaccccggagcaacgtgccttgtttcctacg
gaagcggcgacgttacaccgcttgctgggggcccagccaaacagccaacgcatgcgctat
caccgggggaacccgctgcatcttgatgtgctgatagtggacgaggcttcgatggtggac
ttgcccatgatggcaaggttgattgccgccttaccccccaaggcgcgagtcatcttcctt
ggcgatcgcgatcaactggcctcggtggaggctggagccgtgctgggggatatctgccgg
tttgccgagcagggatatagcgaaacccgtgcggcacagttgtcgcgcctgaccggttgc
cccttcttgcaagggcagccagcgcaggccgaggcagcggtgtgcgatagcctgtgcctg
ctgcgcaagagttaccggtttgatgccaaatccggcattggccagttggctttggcggtg
aatgctggcgatagcaagcgcgccttggcggcgttgaatggcagctatgccgacgtggcg
ggttatccgctggcagaaaccgaagattatcaacggctgttggataactgcgttgctggt
tatcgcgactatctgcggctggtagcagaaggggcgggggccgtaacgatcctggatgcc
tttggccgtttccagttgctctgcgcactgcgcgaagggccatttggcgttgccgggttg
aatgagcgtatcgaaagtgggttgcagcgtgccggtttgattcggcgtaatcctggcccc
gccggtcgctggtatttagggcggccggtgatgattggccgtaatgatagcgcgctgggg
ctgtttaacggcgatataggcattgccttgcccggtgagggcggcgatctgcgcgtgcat
ttccaattaccggacggcagcattaaatcggtacagcctagccgcttaccggcgcatgaa
accgcctatgcgatgacggtgcataaatcacagggttcggagttcgaccacacggcgctg
gtgctgccgaatcattttctgccggtactgacccgcgaattggtttataccgccattacc
cgcgcgcgccagcggttgtcgctctatgcggtagacaaggtgttgataagcgctatccgc
acccccacgcagcgccgcagcggcttggcagaacgtttgcagattgggagatattaa
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