Serratia sp. JSRIV001: KGP17_22320
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Entry
KGP17_22320 CDS
T11585
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
serv Serratia sp. JSRIV001
Pathway
serv00330
Arginine and proline metabolism
serv00480
Glutathione metabolism
serv01100
Metabolic pathways
serv01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
serv00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
KGP17_22320 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
KGP17_22320 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
KGP17_22320 (speF)
Enzymes [BR:
serv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
KGP17_22320 (speF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UAN48703
LinkDB
All DBs
Position
complement(4837570..4839732)
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AA seq
720 aa
AA seq
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MKELKIATSASLVASIETLREIVRVGQTDYTDVAAAVVSVSDVDAGILATLKATGFEIPT
FVAVEGDEQLSPDHLPLITGVFALAAATKAFYMAQLEAAADAYEQALLPPFFKTLKTYVE
MDNSTFACPGHQGGEFFRKHPAGRKFFEFYGETIFRSDMCNADVKLGDLLIHEGSAKDAQ
KHAAKVFNADKTYFVLNGTSASNKVVTNALLTRGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDSKCFDEAYLREQIRHVAPEKAAAARPFRLAIIQLGTYDGTIYNA
RQVIDTIGHLCDYILFDSAWVGYEGFIPMLKECSPLLLELDEHDPGIFVTQSVHKQQAGF
SQTSQIHKKDDHIKGQKRHCNHKHLNNAFMLHASTSPFYPLFAALDVNAKMHAGAAGRRM
WMECVKLGIDTRKQLLARCSQLRPFIPPQVAGKDWQDYDTDLIANDARFFNFVPGEQWHG
FAGYAQGQYLVDPCKLLLTTPGIDAATGQYTEFGIPATILANFLRENGIVPEKCDLNSIL
FLLTPAENPAKMEHLVDMLVQFERYVEADAPLSEVLPTVYRKNQQRYAGYTIRQLCQEMH
DLYVSFDVKQLQKEMFRQDHFPPVMMNPQDANVEFIRDNVELVPIAQAAGRIAAEGALPY
PPGVLCVVPGEVWGGAVQRYFLALEEGINRLPGFSPELQGVYIEKKDHGWKRIFGYMIKP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattgaagatagcaaccagcgccagcctggtagccagcattgaaaccctgcgc
gaaattgtgcgtgtggggcagactgactataccgatgtggcggcggccgtggtctccgtt
agcgatgtggatgccggtattctggcaacgcttaaagcgaccggctttgagatcccgacg
tttgttgccgttgagggggatgaacagctttccccggatcacctgccgttgattactggg
gtatttgccttggctgccgcgaccaaagcgttttacatggcgcagttggaggccgccgcc
gatgcctacgagcaggcgctgttaccgccgttcttcaaaacgctgaaaacctacgtggag
atggataactcaacctttgcctgcccgggccatcagggcggcgagtttttccgcaagcat
ccggcagggcgcaagtttttcgagttttacggtgaaaccattttccgttcggacatgtgc
aacgccgatgtgaagctgggcgatctgctgatccacgaaggctcggccaaggatgcgcaa
aaacacgcggcgaaagtgttcaacgccgataaaacctacttcgtgctgaacggcacttcg
gcctccaataaagtggtgaccaacgcgctgctgacgcgtggcgatctggtgctgttcgat
cgcaataaccataaatccaatcaccacggcgcgttgatccaggccggagcgacgccggtg
tatctggaaaccgcgcgtaacccgtttggttttatcggcggcatcgattctaaatgcttt
gatgaggcttacctgcgcgagcagatccgccatgttgccccggaaaaagccgctgcggca
cggcctttccgcctggcgatcattcagctcggcacctatgacggcaccatttacaacgcc
cgtcaggtgatcgataccatcggccatctgtgcgattacatcctgtttgattcggcttgg
gtggggtatgaaggttttatcccgatgctgaaagagtgctcgccgctgctgttggaactg
gatgagcacgatccgggtattttcgtcacgcaatcggtgcataagcagcaggccgggttc
tcgcagacttcgcagatccataagaaagacgatcacatcaaaggccagaaacgccactgc
aaccataagcatctcaacaatgcgtttatgctgcatgcttcaaccagcccgttttatccg
ctgtttgccgcgctggacgtcaacgccaagatgcatgccggtgccgctggccgccgcatg
tggatggagtgcgtcaagctggggatcgacacgcgtaaacaactgctggcacgctgttcg
cagctgcggccctttattccgccgcaggtggcaggcaaggactggcaggactacgatacc
gacctgatcgccaacgatgcacgcttcttcaactttgtaccgggcgagcaatggcacggt
tttgcaggctatgctcaggggcagtatctggtcgatccttgcaagttgctgctgaccacg
ccggggattgatgcggccaccggtcagtacaccgagttcggtatcccggcgaccattctg
gccaacttcctgcgtgagaacggcatcgtgccagagaagtgcgatctcaactcgatcctg
ttcctgctcaccccggcggagaacccggcgaaaatggagcatctggtggatatgctggtg
cagttcgagcgttacgtcgaggcagatgcgccactgagtgaggtcttgccgacggtctat
cgcaagaatcagcagcgttatgcaggctacaccattcgtcagctgtgccaggagatgcac
gatctgtacgtcagcttcgacgtgaagcagttacaaaaagagatgttccgtcaggatcat
ttcccgccggtgatgatgaatccgcaggatgccaacgtcgagtttatccgcgacaacgtt
gagctggtgccgatcgcgcaggctgccgggcgcatcgcggcagaaggtgccttaccttat
ccaccgggcgtgctgtgcgtggtgccaggcgaagtgtggggcggtgcggtacagcgttac
ttcctggcgctggaggagggcatcaaccgcttgcctggcttctcaccggagttgcagggc
gtgtatatcgagaaaaaagatcacggctggaaacggatttttggctatatgatcaagccg
taa
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