Serratia sp. JSRIV001: KGP17_24935
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Entry
KGP17_24935 CDS
T11585
Symbol
edd
Name
(GenBank) phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
serv Serratia sp. JSRIV001
Pathway
serv00030
Pentose phosphate pathway
serv01100
Metabolic pathways
serv01120
Microbial metabolism in diverse environments
serv01200
Carbon metabolism
Module
serv_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
serv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
KGP17_24935 (edd)
Enzymes [BR:
serv01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
KGP17_24935 (edd)
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GFIT
Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
UAN45580
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Position
5400812..5402626
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AA seq
604 aa
AA seq
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MINSTLARVTQRIIERSKESRAAYLARISAARTQTVHRSQLACGNLAHGFAACQPDDKAA
LKNMVRSDIAIITAYNDMLSAHQPYESYPQRLKQALHSVGAVGQVAGGVPAMCDGVTQGQ
DGMELSLMSRDVIAMSAAIGLSHNMFDGALFLGICDKIVPGLVMSALSFGHLPAVFVPAG
PMSSGLPNKEKVRVRQLYAEGKADRHALLEAEAASYHGVGTCTFYGTANTNQMVMEVMGL
HLPGASFIHPDTPMRDALNDAAARQVTRLTETAGNYLPIGQLVDEKVVVNGIVSLLATGG
STNLTMHMVAMARAAGIIINWNDFSELSDAVPLLCRIYPNGPADINQFQAAGGVQLVVRE
LLNNGLLHQDVHTVAGFGLERYTQEPWLDNGQLAWRNGAASSLDANVIASIAKPFEHHGG
TKVLAGNLGRAVMKTSAVPAENQIIEAPAVVFESQHDIVPAFEAGKLDRDCVVVVRFQGP
QANGMPELHKLMPPLGVLMDRGFKVALVTDGRLSGASGKVPSAIHVTPEAYTGGMLAKVQ
SGDMIRVNGHTGELQLLVAEAELAQRIPYQPDLSGERNGCGRELFSALRSQLSGAEQGAC
CITF
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgattaacagcaccctggcacgtgtaacacaacgcattattgaacgttcaaaagagagc
cgagctgcctatctggcacgtattagcgcagcccgcacgcagacggtacaccgctcgcag
ctagcctgtggcaacctggcccacggttttgccgcctgccagcccgacgataaagccgcc
ctgaaaaacatggtgcgcagcgatatcgccatcatcaccgcttacaacgatatgctttct
gcccaccagccttatgaaagctatccacagcggctaaagcaggcgttacacagcgttggc
gccgttggccaggtcgcaggtggtgtgccagcaatgtgcgacggcgtgacacagggacag
gacggcatggagctgtcgttgatgagccgcgatgtgatagccatgtccgcagccatcggc
ctttcccataacatgttcgacggcgcattgtttctgggtatctgtgacaagattgtgcca
gggctggtaatgtccgccttgtccttcggccatttgcctgccgtatttgtgcctgccggg
ccgatgagcagcggcctacctaataaagagaaagtacgtgtgcgccagctgtatgccgag
ggcaaagccgatcgccacgcgctgctggaagccgaggccgcctcttatcatggcgttggt
acctgcaccttctacggcacggccaacaccaaccagatggtgatggaagtgatgggcctg
catctacccggcgcctctttcattcatccagacacgccaatgcgcgatgcgctcaatgat
gccgccgctcgccaagtcacccgcctgacagaaaccgccggtaattacctgccgataggc
caattggtggatgaaaaagtggtggttaacggcatcgtatcgctcctggccaccgggggc
tccaccaacctgacgatgcatatggtagccatggctcgcgcagcgggtatcatcatcaac
tggaacgacttctctgagctttccgatgcagtgccactgctatgccgcatctaccccaac
ggcccggcggatatcaaccagttccaggcggcgggcggtgtgcaattggtcgtgcgtgag
ctgctgaacaacggcctgttgcatcaggatgtgcataccgtcgccggtttcggcctggag
cgctacactcaggagccttggctggacaatggccagttggcctggcgcaacggggcagca
agttcgctggacgctaacgtgattgccagcatagccaaaccgttcgagcaccatggcggc
accaaggtgctggccggtaatctgggccgtgcggtgatgaagacgtctgcggtgcctgcc
gaaaatcagattatcgaagccccggcggtcgtattcgaaagccagcacgatatcgtcccc
gccttcgaagcaggcaaactggatcgggactgcgtggtggtcgtgcgtttccaggggcca
caggccaatggcatgcctgaactgcataagctgatgccaccgcttggggtattgatggat
cgcggcttcaaggtggcgttggtgaccgatggccgcctgtccggcgcttccggcaaggtt
ccttcggcgatccatgtcaccccggaggcgtacaccggcggtatgctggccaaagtacaa
agcggcgatatgatccgggtgaatggacacaccggcgagctgcaactgctggtcgccgaa
gcagagctggcccagcgcattccctatcaacccgatctgagcggtgaaaggaacggctgt
ggccgtgagctgttcagcgcgttacgcagccagctttccggggccgaacagggcgcctgc
tgcatcacgttttaa
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