Ornithinimicrobium pratense: FY030_00030
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Entry
FY030_00030 CDS
T06221
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
serw
Ornithinimicrobium pratense
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
serw03032
]
FY030_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
serw03400
]
FY030_00030 (gyrB)
Enzymes [BR:
serw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FY030_00030 (gyrB)
DNA replication proteins [BR:
serw03032
]
Prokaryotic type
DNA Topoisomerases
FY030_00030 (gyrB)
DNA repair and recombination proteins [BR:
serw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FY030_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
Motif
Other DBs
NCBI-ProteinID:
QFG70048
UniProt:
A0A5J6V8D7
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All DBs
Position
6578..8719
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AA seq
713 aa
AA seq
DB search
MPELPEAPAQEGKPKSLATAPAYDASTITVLEGLEAVRKRPGMYIGSTSARGLHHLVWEI
VDNSVDEALAGYADRIDVTLLADGGVRVRDNGRGIPTDIHPVEKKPAVELVLTQLHAGGK
FGGGSYKVSGGLHGVGSSVVNALSERLDVQVRQRDQVFEQTYHLGVPQAPLAERAAADDD
ERSTGTTITFWPSVDIFDAIVFDFETIRARFQQYAFLNKGLTIALTDERPREVAPVDALD
EGLDDLETDVRGEETEATEATEAAGEGKGGGGTGKSAVKPRSVVYRYDNGLLDYVTHLNK
SKRSEPVHQEVIAFESADEERMLSIEVAMQWTNAYTESVHTYANAVNTHEGGTHEEGFRA
ALTRMVNDFARENKLLKDKDVNLTGEDIREGLTAVISVKLGEPQFEGQTKTKLGNSEVRG
YVQSAMTDQFGHWLGAHPREGREIVGKAVHAAHARIAARKARDATRRKGLLESGGLPGKL
KDCQTKDPAKSEVFIVEGDSAGGSAVAGRDYFHQAILPIRGKILNVEKARIDKVLANLEV
QALISAFGTGIGEDFDLAKSRYHKIVLMADADVDGQHIRTLLLTLLFRFMRPLIEAGYVY
LAQPPLYRIKWTNADHEFAFSDRERDGLMQRGLAAGRRVPKDSGVQRYKGLGEMNAQELW
ETTMDPQTRVLLQVSLDDAAKADEIFSILMGEDVESRRGFIQRNARDVRFLDI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggctcccgcgcaggagggcaagccgaagtctctggcgaccgcc
ccggcctacgacgcctcgacgatcaccgtgctggagggcctggaggccgtccgcaagcgc
ccggggatgtacatcggctccaccagcgcgcgcggcctgcaccacctggtgtgggagatc
gtcgacaactccgtcgatgaggcactggcagggtatgccgaccgcatcgacgtcaccctg
ctcgccgacggcggggtccgggtgcgcgacaacgggcgcggcatcccgaccgacatccac
ccggtggagaagaagccggccgtcgagctcgtgctcacccagctgcacgccggcggcaag
ttcggcggtgggagctacaaggtctccggcggtctgcacggcgtgggctcctccgtggtc
aacgccctttccgagcgcctggacgtgcaggtgcgccagcgcgaccaggtcttcgagcag
acctaccacctcggggtgccgcaggcgcccctggccgagcgggcagcggccgacgacgac
gagcgctcgaccggcaccaccatcaccttctggcccagcgtcgacatcttcgacgccatc
gtcttcgacttcgagacgatccgcgcccgcttccagcagtacgccttcctcaacaagggc
ctgaccatcgcgctgaccgacgagcggccccgcgaggtggcgcccgtcgacgcgctggac
gagggcctggacgacctcgagaccgacgtgcgtggcgaagagaccgaggccaccgaggcc
accgaggctgcgggtgagggcaagggcggtggtggcaccggcaagagcgcggtcaagccc
cgcagtgtcgtctaccgctacgacaacggcctgctcgactacgtgacccacctcaacaag
agcaagcgcagcgagcccgtccaccaggaggtcatcgccttcgagtccgccgacgaggag
cggatgctctcgatagaggtggcgatgcagtggaccaacgcctacaccgagtcggtgcac
acctacgccaacgcggtgaacacccacgagggcggcacgcacgaagagggtttccgggcg
gcgctgacccgtatggtcaacgacttcgcccgcgagaacaagctgctcaaggacaaggac
gtcaacctcaccggggaggacatccgggagggtctgaccgcggtcatctcggtcaagctc
ggtgagccgcagttcgagggccagaccaagaccaagctcggcaactccgaggtccgcggc
tacgtccagtcggcgatgaccgaccagttcgggcactggctcggggcgcacccgcgcgag
ggccgggagatcgtcggcaaggccgtgcacgccgcccacgcccggatcgccgcgcgcaag
gcccgcgacgcgacccggcgcaagggcctgctggagtccggtggcctgccgggcaagctc
aaggactgccagaccaaggacccggccaagtccgaggtcttcatcgtcgagggtgactcg
gccggtggctcggccgtggccggccgggactacttccaccaggcgatcctgccgatccgc
ggcaagatcctcaacgtggagaaggcccggatcgacaaggtcctggccaacctggaggtt
caggcgctgatcagtgccttcggcaccggcatcggcgaggacttcgacctcgccaagagc
cgctatcacaagatcgtgctgatggccgacgccgacgtcgacggccagcacatccggacc
ctgctgctcacgctgctcttccgcttcatgcgcccgctcatcgaagctggctacgtctac
ctcgcccagccgccgctctaccggatcaagtggaccaacgccgaccacgagttcgccttc
tccgaccgtgagcgcgacgggctgatgcagcggggtctggccgcaggccggcgggtcccg
aaggactccggcgtgcagcggtacaagggtctgggtgagatgaacgcccaggagctgtgg
gagaccacgatggacccgcagacccgggtcctgctgcaggtgtcgctggacgacgcggcc
aaggccgacgagatcttctccatcctcatgggcgaggacgtggagtcccgccgcggtttc
atccagcgcaacgcccgcgacgtgcggttcctggacatttag
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