Ornithinimicrobium pratense: FY030_04420
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Entry
FY030_04420 CDS
T06221
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
serw
Ornithinimicrobium pratense
Pathway
serw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FY030_04420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serw03019
]
FY030_04420
03400 DNA repair and recombination proteins [BR:
serw03400
]
FY030_04420
Enzymes [BR:
serw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FY030_04420
Messenger RNA biogenesis [BR:
serw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FY030_04420
DNA repair and recombination proteins [BR:
serw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FY030_04420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
HEM4
RecQ_Zn_bind
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QFG68064
UniProt:
A0A5J6V453
LinkDB
All DBs
Position
973452..975662
Genome browser
AA seq
736 aa
AA seq
DB search
MQHAKQSADPALDATLDGAALAALRRLVGREDTDFRDGQLEAVRALVEQRARVLVVQRTG
WGKSAVYFVATALRRAQGAGPTVIVSPLLALMRDQIAAATRAGVRAVTMNSANATEWDQV
RQALAADQVDVLLVSPERLNNPRFRDEQLPDLAARCGLLVVDEAHCISDWGHDFRPDYRR
IRTLLEGLPDGTPVLATTATANERVVDDVVEQLGAGGAEVRTIRGPLARASLRLGVLPRL
TPEQRLGWLLAHLETLPGSGIVYALTVSAAQDVAEALRAAGHRVAAYTGRTDTEERERLE
GALRDNQVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRATERADVLLL
PGSEDRDIWNYFATVSMPRQDQADAVLAALGEAGRPLSTPVLETIVDVRRTRLELLLKVL
DVDGAVEKVQGGWVSTGQPWVYDKERYTRVADARVREAELMLTYQATDGCRMAFLQECLD
DPSAAPCGRCDRCDSTWFPTEIPEGAVGAARDRLGAVGVPVEPRGQWPTGMPRLGVDVKG
RIPIEEQASEGRALARLSDLGWGQRLRTVLAEGTSQADPEVPEDPERGRDLVPGQPVPED
LTRAVVEVLRGWGWAERPVGVVAMPSRRRPALVGSLAQHISQIGRLPLLGTLDLVHGGPV
GEPGGNSAFRLANVWGRIGVGPELATALRELQSRAAGPVLLVDDLADSRWTLTVAARELR
LAGAPGVLPLVLALEG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatgcgaagcagagcgcggacccggccctcgacgccaccctggacggggcggcg
ctcgcggcgctgcggcggctcgtcggtcgggaagacacggacttccgcgacgggcagctg
gaggcggtgcgggcgctggtggagcaacgggcccgggtgctggtcgtgcagcggaccggg
tggggcaagtcggccgtctacttcgtggcgacggccctgcgtcgggcgcagggggccggg
ccgacggtgatcgtctcccccttgctggcgctgatgcgcgaccagatcgcggcagcaaca
cgggccggggtgcgggccgtgacgatgaactccgccaacgccaccgagtgggaccaggtg
cgtcaggccttggcggcggaccaggtggacgtgctgctggtcagcccggagcggctgaac
aacccacggttccgcgacgagcagctgcccgacctcgcggcgcggtgcggtctgctggtc
gtcgacgaggcgcactgcatcagcgactgggggcacgacttccgccccgactaccgccgg
atccggacgctgctggaggggctgcccgacgggacgcctgtgctggccacgacggcgacc
gccaacgagcgggtggtcgatgacgtggtcgagcagctgggtgccgggggcgccgaggtc
cgcacgatccgcgggccgctggcccgggcgtcgctgcggctgggcgtgctgccgcggctc
acgcccgagcagcggctgggctggttgctggcgcacctggagacgctgccgggcagcggg
atcgtctacgccttgacggtgtcggcagcgcaggacgtggccgaggcgctgcgggcggcc
gggcaccgggtcgcggcctacaccggccggaccgacaccgaggagcgcgagcgcctcgag
ggcgccctccgggacaaccaggtcaaggcgttggtggcgacgagcgcgctggggatgggc
ttcgacaagccggacctggggttcgtggtgcatctgggcgcgcccagctcaccggtggcc
tactaccagcaggtcggtcgagccggtcgcgccaccgagcgcgcggacgtgctgctgctg
ccgggctcagaagatcgggacatctggaactacttcgcgacggtgtcgatgccgcggcag
gaccaggccgacgcggtgctggcggcgctgggggaggcgggccggccgttgtcgactccg
gtgctggagacgatcgtcgacgtgcgccgcacccggctcgagctgctgctcaaggtgctc
gacgtggacggcgcggtggagaaggtgcagggcggctgggtctcgaccgggcagccctgg
gtctacgacaaggagcgctacacccgcgtcgcggacgcccgcgtccgtgaggccgagctg
atgctgacctaccaggccaccgacggctgccggatggccttcctgcaggagtgcctggac
gacccgtcggcggcgccctgcggccggtgcgaccggtgcgacagcacgtggtttcccacc
gagatcccggagggcgcggtcggcgccgcgagggaccggctcggcgccgtgggtgtgccg
gtcgagccgcgggggcagtggcccacgggtatgccgcgcctcggcgtggacgtcaagggc
cgcatccccatcgaggagcaggcatcggagggccgggccctggcccggctgtccgacctg
ggctggggtcagcggctgcggacggtgctggccgagggcacctctcaggccgaccccgag
gtgccggaggacccggagcgggggcgtgacctcgtgccggggcagccggtgcccgaggac
ctcacccgcgccgtcgtcgaggtgctgcgtggctggggctgggccgagcgacccgtgggc
gtggtggcgatgccctcgcggcgccgcccggcgctcgtcggctctctggcgcagcacatc
agccagatcggccggctgccgctgctgggcacgctggacctggtccacggcggcccggtg
ggcgagccgggcggcaacagcgccttccggctggccaacgtctggggccgcatcggcgtc
ggacccgagttggcgactgccctgcgcgagcttcagtcccgggcggccggtcccgtgctg
ctcgtggatgacctggccgactcgcgctggactctcacggtcgcggcgcgcgagctacgg
ctggccggcgctcccggcgtgctgccgctggtgctggcgctcgagggctga
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