Ornithinimicrobium pratense: FY030_08515
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Entry
FY030_08515 CDS
T06221
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
serw
Ornithinimicrobium pratense
Pathway
serw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FY030_08515 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serw03400
]
FY030_08515 (uvrA)
DNA repair and recombination proteins [BR:
serw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FY030_08515 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FY030_08515 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND1
RsgA_GTPase
AAA_21
APS_kinase
AAA_23
AAA_25
DnaJ_CXXCXGXG
nSTAND3
NACHT
AAA_22
MMR_HSR1
ATPase
MeaB
cobW
NTPase_1
SLFN-g3_helicase
NB-ARC
Viral_helicase1
DUF87
Motif
Other DBs
NCBI-ProteinID:
QFG70236
UniProt:
A0A5J6VAD5
LinkDB
All DBs
Position
complement(1859665..1862625)
Genome browser
AA seq
986 aa
AA seq
DB search
MPGPRHDRLVVQGAREHNLKDVSVDIPRDALVVFTGLSGSGKSSLAFDTIFAEGQRRYVE
SLSAYARMFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVHDYLRLLYARV
GRPHCHVCGEPVERQTPQQIVDRLLELPSGTRFQLLAPVVRGRKGEFVDLFSELQAKGFA
RARVDGEPVQLTDPPTLEKQRKHSIEVVVDRLVAKPGEPSDDGAPTVDRAYARRLTDSVE
TALSLAGGIVVAEFVDVPAAGDEPGSRALPVDAAGVELPRERRFSERMACPNEHPLSIDE
VEPRSFSFNSPFGACPECTGIGVELEVDPELVVREDQSILAGAIVAWSTASGGLSDYFLR
VLGGLADDLDFRLDVPWQALPGRAKDAILQGYKHKVHVRYRNRFGRERSYSTGFEGVIPY
IKRKHGETESDSSRERYEGYMRQVPCPACKGARLKPEILAILVGGRSIAEVSAMSIDECA
EFLAQVQYTPREAAIAAQVSREIAARLGFLLDVGLDYLSLDRPAGTLSGGEAQRIRLATQ
IGSGLVGVLYVLDEPSIGLHQRDNHRLIETLTRLRDLGNTLIVVEHDEDTIATADWVVDI
GPGAGEHGGHVVHSGSVRDLLSHPTSLTGQYLSGRKAIPLPEARRPQDGRAVAVRGAREN
NLQDTDVSFPLSNLVAITGVSGSGKSTLVNDILYKVLANQLNGARHVPGRHRRVDGLDQL
DKVVHVDQSPIGRTPRSNPATYTGLFDHIRKLFATTTEAKVRGYLPGRFSFNVKGGRCEA
CSGDGTLKIEMNFLPDVYVPCEVCHGRRYNRETLEVHFKGRTIADVLDMPIEEAADFFAA
VPVISRHLSTLNQVGLGYVRLGQPATTLSGGEAQRVKLAAELQKRSTGRTIYVLDEPTTG
LHFEDIRRLLAVLQGLVDKGNTVLVIEHNLDVIKSADWIVDMGPEGGRGGGTVVVEGTPE
QVARHAGSHTGRFLSPILDVNRRSTA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
gtgccaggacctcgtcacgaccgtctggtggtgcagggggcccgtgagcacaacctcaag
gacgtctcggtcgacatcccccgcgacgccctcgtggtgttcaccgggctgtctggctcg
ggcaagtcctccctcgccttcgacaccatcttcgccgaggggcagcgccgctacgtcgag
tccctctccgcctatgcgcgcatgttcctgggccagatggacaagcccgacgtcgacttc
atcgaaggcctgtccccggcggtctccatcgaccagaagtcgaccaaccgcaacccgcgc
tcgaccgtcggcacgatcaccgaggtccacgactacctgcgcctgctctacgcccgcgtc
ggtcgtccgcactgccacgtctgcggggagccggtcgagcggcagaccccccaacagatc
gtcgaccggctgctggagttgccgtccggcacccgcttccagttgctggcgccggtcgtc
cggggccgcaagggcgagttcgtcgacctcttctccgagctgcaggccaagggcttcgcg
cgtgcccgggtggacggtgagccggtgcagctgaccgacccgccgaccttggagaagcag
cgcaagcacagcatcgaggtggtcgtcgaccggctcgtcgccaagccgggggagccgagc
gacgacggtgcaccgaccgtggaccgtgcctatgcccggcggctcaccgactcggtcgag
accgccctgtccctggccgggggcatcgtggtcgccgagttcgtcgacgtgcccgccgcg
ggggatgagccgggcagccgggccctgccggtggacgccgccggtgtcgagctgccgcgc
gagcgtcggttctccgagcggatggcctgccccaacgagcaccccctctccatcgacgag
gtcgagccgcgctcgttctccttcaacagccccttcggcgcctgcccggagtgcaccggc
atcggcgtggaactggaggtggaccccgagctggtggtccgcgaggatcagagcatcctc
gccggcgccatcgttgcctggtccaccgccagtggcggcctcagcgactacttcctgcgg
gtgctcggcgggctcgccgacgatctcgacttccgcctggacgtgccctggcaggccctg
cccgggcgggccaaggacgcgatcctgcagggctacaagcacaaggtgcacgtgcgctac
cgcaaccggttcggccgggagcgcagctactccaccggcttcgagggcgtcatcccctac
atcaagcgcaagcacggggagaccgagtccgacagcagtcgggaacgctacgagggctac
atgcgccaggtgccgtgcccggcgtgcaagggcgcccggctcaagccagagatcctggcg
atcctcgtcggcggccggagcatcgccgaggtcagcgcgatgtcgatcgatgagtgcgcc
gagttcctcgcccaggtgcagtacaccccccgcgaggctgctatcgcggcccaggtgagc
cgcgagatcgcggcccggctgggtttcctgctggacgtcggtctggactacctgtccctg
gaccgcccggctggcaccctgtccggcggcgaggcgcagcggatccggctggccacccag
atcggctcgggtctggtcggggtgctctacgtcctcgacgagccgagcatcgggctgcac
cagcgggacaaccatcggctcatcgagaccctgacccgcctgcgggacctcggcaatacg
cttatcgtcgtcgagcacgacgaggacaccatcgccaccgccgactgggtcgtcgacatc
gggccaggggcgggtgaacacggcggccacgtcgtgcacagcggctccgtcagggacctg
ctctcccacccgacctccctgaccggccagtacctctccggtcgcaaggccatcccgctg
ccggaggcgcggcgcccgcaggacggtcgcgcggtggccgtgcgcggtgcccgggagaac
aacctgcaggacaccgatgtgagcttcccgttgagcaacctggtggcgatcaccggggtc
agtggctcgggcaagtccacgctggtcaacgacatcctctacaaggtgctggccaaccag
ctcaacggggcccggcacgtcccggggcggcaccggcgggtggacgggctggaccagctg
gacaaggtggtgcacgtcgaccagagcccgatcggccgcaccccccgcagcaacccggcg
acctacaccggcctgttcgaccacatccgcaagctgttcgccaccacgaccgaggccaaa
gtccgcggctacctgccgggccggttcagcttcaacgtcaagggcgggcgctgcgaggcc
tgctccggcgacggcacgttgaagatcgagatgaacttcctgcctgacgtgtacgtgccc
tgcgaggtgtgccacggtcgccgctacaaccgggagacgctcgaggtgcacttcaagggc
cggaccatcgccgacgtcctcgacatgccgatcgaggaggccgccgacttcttcgccgcc
gtgccggtgatcagccggcacctgagcacgctcaaccaggtcgggctggggtatgtgcgc
ctgggccagccggccacgaccctgtccggtggtgaggcccagcgggtcaagctcgccgcc
gagctgcagaagcgctccaccgggcgcaccatctacgtcctggacgagcccacgaccggg
ctgcacttcgaggacatccggcggctgctcgcagtgctgcagggcctggtcgacaagggg
aacacggtcctggtcatcgagcacaacctcgacgtgatcaagtcggccgactggatcgtc
gacatgggcccggaaggtggccggggcggtggcactgtcgtcgtcgaaggcacgcccgag
caggtggcccggcacgccggcagccacaccggccggttcctgtcccccatcctcgatgtc
aaccgcaggtccacggcatga
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