Ornithinimicrobium pratense: FY030_10590
Help
Entry
FY030_10590 CDS
T06221
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
serw
Ornithinimicrobium pratense
Pathway
serw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FY030_10590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
serw03019
]
FY030_10590
Messenger RNA biogenesis [BR:
serw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FY030_10590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QFG69090
UniProt:
A0A5J6V528
LinkDB
All DBs
Position
complement(2308661..2310346)
Genome browser
AA seq
561 aa
AA seq
DB search
MSHPHPELSPPAPLVDGGVRVIPLGGLGEVGRNMAVLEHRGKLLVIDCGVLFPEEHHPGV
DLILPDFGPIEDRLDDIVAVVLTHGHEDHIGAVPYLLRLREDIPLVGSQLTLALVEAKLK
EHRIKPLTLGVKEGGREVFGPFDCEFVAVNHSIPDALAVFVRTSGGTVLHTGDFKMDQLP
LDGRITDLRAFARLGEEGVDLFMTDSTNAHIPGFTTPERNITPAIERVFHDARRRIIVAC
FASHVHRVQQVLDAAVESGRKVAMVGRSMIRNMGIAADLGYLHIPDGVLVDLGRLTQLPE
DRQVLICTGSQGEPMAALSRMANGDHKIDVGQDDTVLMASSLIPGNENAVYRVINGLTRR
GAKVVHKENALVHVSGHASAGELLYCYNIVRPRNVMPVHGEWRHMVANGDLAVATGVPQE
NVVLAEDGVVVDLVDGQARIAGAVDVGYVYVDGSTVGAADETMLKDRRILRDEGFVTVIV
VRDASSGAIAAGPEIQTRGFADGQEPFEKVRPRLVEALQEAERNGVQDTYQLQQVIRRTI
GSFVGNKLRRRPMIIPIVIDA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgagtcacccgcaccccgagctgagccctcctgcccccttggtcgacggcggcgtgcgc
gtcatccccctgggcgggctgggtgaggtcgggcgcaacatggccgtcctcgagcaccgg
ggcaagctgctcgtcatcgactgcggcgtgctctttcccgaggagcaccacccgggcgtg
gatctcatcctgcccgacttcggccccatcgaggaccggctcgacgacatcgtggcggtc
gtgctcacccacggccacgaggaccacatcggggcagtgccctacctgctgcggctgcgg
gaggacatccccctggtcggctcgcagctcaccctggccctggttgaggccaagctcaag
gagcaccggatcaagcctctgaccctgggggtcaaagaggggggtcgggaggtgttcggc
cccttcgactgtgagttcgtggcggtgaaccactccatccccgacgccctggcggtcttc
gtgcgcacctcgggcggcaccgtcctgcacacgggcgacttcaagatggaccagctgccg
ctggacggccggatcaccgacctgcgtgccttcgcccggctgggggaggagggggtcgac
ctgttcatgaccgactccaccaacgcgcacatccctggcttcaccacgccggagcgcaac
atcaccccggcgatcgagcgcgtcttccatgacgcgcgccgcaggatcatcgtggcctgc
ttcgcctcccatgtgcaccgcgtgcagcaggtgctggacgctgcggtcgagtccggccgc
aaagtcgcgatggtggggcgctcgatgatccgcaacatgggcatcgccgccgacctgggc
tacctgcacatccccgacggggtgctggtcgacctgggccggctgacccagctgcccgag
gaccggcaggtgctcatctgcaccgggtcccagggcgagccgatggccgcgctgtcgcgg
atggccaacggcgaccacaagatcgacgtcggccaggacgacacggtcctgatggcctcc
tcgctcatcccgggcaacgagaatgccgtctaccgggtcatcaacgggctgacccggcgg
ggcgcgaaggtcgtgcacaaggagaacgccctcgtgcacgtctcgggccacgccagcgcc
ggcgagctgctctactgctacaacatcgtccggccgcgcaacgtcatgccggtgcatggt
gagtggcggcacatggtcgccaacggtgacctcgcggtggcgaccggcgtgccgcaggag
aacgtggtgctggctgaggacggtgtggtcgtcgacctcgtcgacgggcaggcccggatc
gccggcgcggtcgacgtcggctacgtctacgtcgacggctcgaccgtaggcgccgcggac
gagaccatgctcaaggatcgccgcatcctgcgggacgagggcttcgtcaccgtgatcgtg
gtccgcgacgcatcctccggcgcgatcgccgccggcccggagatccagacccgtggcttc
gccgacgggcaggaacccttcgagaaggtgcggccgcgcctggtcgaggcgttgcaggag
gctgagcgcaacggcgtccaggacacctaccagctgcagcaggtgatccgccggacgatc
ggctccttcgtcggcaacaagctgcggcggcggccgatgatcatccccatcgtcatcgac
gcctga
DBGET
integrated database retrieval system
