Ornithinimicrobium pratense: FY030_12655
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Entry
FY030_12655 CDS
T06221
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
serw
Ornithinimicrobium pratense
Pathway
serw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FY030_12655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serw03400
]
FY030_12655
Enzymes [BR:
serw01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FY030_12655
DNA repair and recombination proteins [BR:
serw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FY030_12655
Prokaryotic type
FY030_12655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QFG69439
UniProt:
A0A5J6V6C3
LinkDB
All DBs
Position
2748955..2749644
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AA seq
229 aa
AA seq
DB search
MAGVNAATPLRDLVHPSWAEALAPAEGTVAALGDFLRSELAAGRGYLPVGQHVLRVFEQP
LEQVRVLIVGQDPYPTPGHAVGLSFSVAPEVAPIPRNLANIYTELVEDLGVARPSTGDLS
PWAERGVMLLNRVLTVRPGAPASHRGKGWEEVTELAIEALVARGGPLVAILWGRDARTLG
SRLGEVPRVESAHPSPLSARGGFFGSRPFSRTNDLLARQGGDPIDWSLP
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtggctggcgtgaacgccgccacacccctgcgtgacctcgtgcacccgagctgggcggag
gcactggccccggccgaggggaccgtcgccgcgctgggcgacttcctgcgctccgagctg
gcggccgggcgcggctacctgccggtgggtcagcacgttctgcgtgtcttcgagcagccg
ctggagcaggtgcgggtcctcatcgtcgggcaggacccgtacccgacgccagggcacgcg
gtggggctgagcttctcggtcgcccccgaggtggcgccgatcccccgcaacctggccaac
atctacaccgagctggtcgaggacctcggcgtcgctcgcccctcgaccggtgacctctcg
ccctgggcggagcgtggggtcatgctgctcaaccgggtgctcaccgtgcgcccaggggcc
ccggccagccaccggggcaagggctgggaggaggtcaccgagctggcgatcgaggccttg
gtcgcccgcggcgggccgttggtcgcgatcctgtggggccgcgacgcccgcacgctgggg
tcgcggctcggcgaggtgccccgcgtcgagtccgcccacccgtccccgctgtcggcccgc
ggcggcttcttcggcagccgtccgttcagccggaccaacgacctgctcgcccgccagggc
ggcgacccgatcgactggagcctgccgtga
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