Ornithinimicrobium pratense: FY030_14850
Help
Entry
FY030_14850 CDS
T06221
Name
(GenBank) AAA family ATPase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
serw
Ornithinimicrobium pratense
Pathway
serw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FY030_14850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serw03400
]
FY030_14850
Enzymes [BR:
serw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FY030_14850
DNA repair and recombination proteins [BR:
serw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FY030_14850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_22
PDDEXK_1
AAA_30
AAA_16
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
QFG69808
UniProt:
A0A5J6V7R9
LinkDB
All DBs
Position
3221730..3225227
Genome browser
AA seq
1165 aa
AA seq
DB search
MTMRQFSITDPLPQGTVLLEASAGTGKTWTIAALVTRYVAEGVATLPEMLVVTFGRAASQ
ELRARVREQLDAAERALADPPPEQERDELLTLLLAGDPDEVAARRTRLRAALSNLDAATI
ATTHQFCQQVLRSLGVAGTTDASATLVEDLDELLVEVVDDIYLRGFMKDEAAPLFSRGDA
LKIARRVIDDTHAELRPTIAERGSAPDRRVRFAKAVREEMDVRKRRLQVMHYNDLLSQLA
EALKDEGSPARARMRARWRVVLVDEFQDTDPVQWQVLDRAFSGHAHAMVLIGDPKQAIYA
FRGGDVVTYLQAAATAVDQRTLPRNYRSDAGVVDALGTLLGGAQLGDKQIAVHPVSAHRP
ATRLAGAPNTAPVRVRQVLLKDHLGGDSRMGAVRPFIARDLAQDVAALLASDATFDGRPV
QARDIAVIAHKGKDLAEAQRALHALGIPAVSTGGSTVLHSQAAHDWLALLEAMVAPHRAL
LTRAAALTDLLGYAVPQLDTGGADLDDELAQRCRELAHVYARQDVAAVLELLTVAGLPAR
VLGRVGGERVLTDLRHVAQLLHEVGRRDQLGLVALLEWLRAGMTEDAPQSSGARTRRLDS
DAAAVQLVTIHGSKGLQYPVVYLPSLTDRWVSDVPDIPLLHEEPPARTRCLDVGGAAGNP
GWDASVRAHKDEDSGESLRLLYVALTRAQSQVVTWWAPCSNSANSALHRVLFGRAPGEGP
VPDRVAVPRRDDQAGERLRQWAAEGAFVLEPADPAAEVPEVPVPPAPELRLATWTRQVDT
GWRRTSYTALSTPQDEQLAGVGSEPEVVPREDEPDAVDPVVEGTPALPGLEAAVPGAEVP
SPMAELPVGATFGSLVHGVLEDADPQADDLHAELLEHIREQKVLWPVDLGEGGEESLAEA
LVAVCDTPLGPLAGNATLRDIGRAGRLTELDFELPLGGGDLRRGAGGGPKQGRGSGGPGS
GHGSGAPGAGERGSGEKGSGERGAGPGGTAYPPVVLGDLVPLLRAHLRPGDPVRGWADVL
EGNPELGGQELRGYLTGSVDVVLRTGGRYLVVDYKTNWLGRPEQPLTAADYRPEKLDEAM
GHSSYPLQALLYAVVAHRFLRWRLRGYDPARHLGGVLYLYLRGMCGPQTPVVDGHPCGVF
SWRPPVELVTGVSDLLDGRRAAGAA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcgccagttctccatcaccgacccgttgccgcagggcaccgtgctgctcgag
gcgagtgccggcaccggcaagacgtggacgatcgcggccctggtcacccgctacgtcgcc
gagggcgtcgccaccctgcccgagatgctggtcgtcaccttcggccgggccgcctcccag
gagctgcgcgcccgggtccgggagcagctggacgccgccgagcgagccctggcggacccg
cccccggagcaggagcgtgacgagctgctcaccctgctcctcgccggtgacccggacgag
gtggcggcccgccgcacccggctgcgcgcggcgctgtccaacctcgacgccgccaccatc
gccaccacgcaccagttctgccagcaggtgctgcgcagcctcggtgtcgccggcacgacc
gacgcctccgccaccctcgtcgaggatctcgacgagctgctcgtcgaggtggtcgacgac
atctacctgcgcggcttcatgaaggacgaggcggcgcccctgttctcccgaggggacgca
ctgaagatcgcccgccgcgtcatcgacgacacccacgccgagctgcgcccgacgatcgct
gagcggggcagcgcccctgaccggcgggtccgcttcgccaaggcggtccgcgaggagatg
gacgtgcgcaagcgccggctgcaggtgatgcactacaacgacctgctcagccagctggcc
gaggcactcaaggacgagggctctcccgcccgggcccggatgcgggcgcgctggcgggtg
gtgctcgtcgacgagttccaggacaccgacccggtccagtggcaggtgctggatcgcgcc
ttctccggccacgcgcacgcgatggtgctcatcggcgaccccaagcaggcgatctacgcc
ttccgcggcggcgacgtcgtcacctacctgcaggcggcggccacggcggtcgaccagcgc
acgctgccccgcaactaccgctccgacgccggcgtcgtcgacgccctcggcacgctgctg
ggtggcgcccagctcggcgacaagcagatcgcggtccacccggtgagcgcccaccgaccc
gccacccgtctcgccggggccccgaacaccgcgcccgtccgggtgcggcaggtgctgctc
aaggaccacctaggcggcgacagccggatgggtgcggtgcggcccttcatcgcccgggac
ctagcccaggacgtcgccgcgctcctggcctccgacgccaccttcgacggccgcccggtc
caggcccgggacatcgcggtcatcgcccacaagggcaaggacctggccgaggcgcagcgc
gccctgcacgcgctcggcataccggccgtcagcaccggggggtcgaccgtcctgcacagc
caggcggcgcacgactggctggcgctgctggaggcgatggtggcgccccaccgcgcgctg
ctgacgcgggcagcggcgctcaccgacctgctcggctacgcggtgccacagctcgacacc
ggcggcgccgacctcgacgacgagctggcgcagcgctgccgcgagctggcgcacgtctac
gcccgccaggatgtcgctgccgtgctggagctgctcaccgtcgccggcctgccggcccgg
gtgctgggccgggtgggcggcgagcgggtcctgaccgacctgcggcacgtggcgcagctg
ctgcacgaggtcggccggcgtgaccagctggggctggtcgccctgctggagtggctgcgc
gccggcatgaccgaggacgccccgcagtcctcaggagcgcggacccggcggctggacagc
gacgccgcggcggtgcagctggtgacgatccacgggagcaaggggctgcagtaccccgtc
gtctacctgcccagcctgaccgaccggtgggtcagcgacgtgccggacatcccgctcctg
cacgaggagccgcccgcccggacacgctgcctcgacgtcggcggggcggccggcaacccg
ggctgggacgcctcagtgcgcgcgcacaaggacgaggactccggggagtcgctgcggctg
ctctacgtggcgctgacccgggcccagtcgcaggtcgtgacgtggtgggcgccgtgcagc
aactccgcgaactccgcgctgcaccgggtgctcttcggccgcgctcccggggagggaccg
gtgccggaccgggtcgctgtgccgcgtcgcgacgaccaggccggtgagcggctcaggcag
tgggccgccgaaggcgccttcgtgctggagccggccgacccggcggccgaggtgcccgag
gtgcccgtgccgccagcgccagagctgcggctggcgacctggacccggcaggtcgacacc
ggctggcgccgcacctcctacaccgcgctgtccaccccgcaggacgagcagctcgcgggg
gtcggcagcgagcccgaggtcgtgccgcgcgaagacgagccggacgctgtcgacccggtg
gtcgaggggacgccggcgctgccgggtctggaggcggcggtgccgggtgcggaggtgcct
tcaccgatggccgagctgccggtcggggcgacgttcggctcgctggtgcacggggtcctc
gaagacgccgaccctcaggccgacgacttgcacgcggagttgctggagcacattcgcgag
cagaaggtgctgtggcccgtcgacctcggggagggcggggaggagtcgctcgccgaggct
ctggtcgcggtctgcgacaccccgttgggaccgctcgccggcaacgcaacgctgcgcgac
atcggccgggccggccggctgaccgagctggacttcgagctgccgctgggtggcggtgac
ctgcggcggggggccggtggcggtccaaaacaggggcgtggctcgggcggaccgggaagt
gggcacggctcaggcgcgccgggcgccggcgagcggggctcgggcgagaagggctcgggc
gagaggggcgccggaccaggcggcacggcataccccccggtcgtgctgggcgacctcgtg
ccgctgctgcgtgcccacctgcgcccgggagaccccgtccgcggctgggccgacgtgctc
gagggcaaccccgagctgggcgggcaggagctgcgcggctacctgaccgggtcggtcgac
gtggtgctgcgcacgggcgggcgctacttggtcgtggactacaagaccaactggctgggg
cgtccggagcagccgttgaccgcggccgactaccgcccggagaagctcgatgaggccatg
gggcacagctcctaccccctgcaggcgctgctgtatgccgtcgtcgcgcaccggttcctg
cggtggcggctgcgcggctacgacccggcgcggcacctgggcggggtgctctacctctac
ctgcgcgggatgtgcggaccgcagacgccggtggtcgacgggcacccgtgcggggtcttc
tcctggcggccgccggtggagctggtcacgggcgtctctgacctgctcgacggtcggcgc
gcggcgggagcggcatga
DBGET
integrated database retrieval system
