Ornithinimicrobium pratense: FY030_14855
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Entry
FY030_14855 CDS
T06221
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
serw
Ornithinimicrobium pratense
Pathway
serw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FY030_14855 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
serw03400
]
FY030_14855 (recD)
Enzymes [BR:
serw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FY030_14855 (recD)
DNA repair and recombination proteins [BR:
serw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FY030_14855 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
AAA_11
UvrD-helicase
Viral_helicase1
NAT10_TcmA_helicase
AAA_22
SH3_13
PhoH
TraI_hel_assoc_N
NTPase_1
AAA_29
AAA_28
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QFG69809
UniProt:
A0A5J6V7I8
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All DBs
Position
3225241..3227202
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AA seq
653 aa
AA seq
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MSIVETFEQVGDFDRRLALSAKGVLGQFNAAGVITAADVHIARTLARITREQDESAVLAV
AMASRGVRSGSVAIDLTDLAADGASALPDLPWPDPQDWVESVAGSKLVAQGALVVDQGLV
YLQRYHHQEVQVVQDLQARAALEPPAVDEAVLAAGLQRIFPGQGYAEQRAAADVAIRAGT
SVLTGGPGTGKTTTVAGVLALLAEQAAAAGGRPLRVGLAAPTGKAAARVKAALDGAMAGI
LARTSDPATRAVVEPLAQVEASTLHRLLGWRPDSRTRFRHHRAYRLPHDVVLVDEASMVS
LTHMARLLEALRPTARLILVGDADQLVSVDAGAVLADLVAGASPLASPAAGASSAASPAA
GASGPDPVAETALASNPPVAVARLRTVHRFGATIGALAEALRQGDADAVVAALSSGSPEV
EWVGDDEPDHTAYLRPVLTRHARAVLDAARRGDGEAALAALGEHRLLCAHRAGPHGVRTW
NQLVEVWLGEETGMTFYEPMYLGRPLLVTANDYATGVLNGDTGVVVASQRPDGTPVRMAV
IEGPSGAQRFAPSRLGEVETMHAMTIHKAQGSQAREITVLLPESDSALLTRELFYTAVTR
AQERVRVVGSEAVVRAAVERRVVRASGLQGRLRALADPPSAESGAADLPPLTG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcgtggagaccttcgagcaggtcggtgacttcgaccggcggctggcgctgtcc
gccaagggcgtgttggggcagttcaacgcggcgggggtgatcaccgcggccgacgtgcac
atcgcgcgcaccctggcccggatcacgcgggagcaggacgagtccgccgtgctcgccgta
gcgatggcctcgcgcggggtgcggtcggggtcggtggcgatcgacctgaccgacctggcg
gccgacggcgcgtcggccctgcccgacctgccgtggccggacccgcaggactgggtggag
tccgtcgccggcagcaagctcgtggcgcagggcgcgctcgtcgtcgaccagggactggtc
tacctgcagcgctaccaccaccaggaggtgcaggtggtgcaggacctgcaggcccgggcc
gcgctggagccaccggcggtcgacgaggcggtgctggcggccgggctgcagcggatcttc
cccggccaggggtatgccgagcagcgcgccgccgcggacgtcgccatccgggccggcact
agcgtgctcaccggcgggcccggcaccggcaagacgaccaccgtcgcgggcgtgctggcg
ctgctggccgagcaggctgcggctgcgggaggtcggccgctgcgggtcgggctggccgcg
ccgaccggcaaggccgcggcgcgggtcaaggccgccctcgacggggcgatggccggcatc
ctggcgcgcacctccgacccggcgacccgggcggtcgttgagccgctggcccaggtcgag
gcctcgaccctgcaccggctgctcggctggcgccccgacagccggacccgcttccggcac
caccgggcctaccggctcccccacgacgtggtgctcgtggacgaggcgtcgatggtctcg
ctgacccacatggcccggctgctggaggcgctgcgacccaccgcgcggctgatcctcgtc
ggcgacgccgaccagctggtctccgtcgacgccggcgcggtgctggcggacctggtggcg
ggcgcatcccctttggcctcccccgcggcgggggcgtcttctgctgcttcccccgctgcg
ggcgcatcagggccggacccggtggcggagaccgccctcgcctccaaccccccggtggca
gtcgcccgtctgcgcacggtgcaccggttcggcgccacgatcggcgccctggccgaggct
ctgcggcagggtgacgccgacgcggtcgttgccgccctgtcctccggcagccccgaggtc
gaatgggtgggagacgacgagccggaccacacggcatacctgcgtccggtgctcacccgg
cacgcccgcgcggtgctggacgccgcccggcggggcgacggcgaggctgcgctggcggcg
ctgggcgagcaccggctgctgtgcgcgcaccgcgccgggccgcacggcgtgcgcacgtgg
aaccagctggtcgaggtgtggctcggcgaggagacggggatgaccttctacgagccgatg
tacctcgggcggccgctgctggtgaccgccaacgactacgcgacgggcgtgctcaacggg
gacacgggcgtggtggtcgcctcgcagcggccggacggcactccggtgcggatggcggtc
atcgagggaccgtcgggggcgcagcggttcgcgccgagccggctcggggaggtcgagacg
atgcacgcgatgacgatccacaaggcgcagggcagccaggcgcgggagatcaccgtgctg
ctgcccgagtcggacagtgcgctgctgacccgcgagctgttctacaccgcggtgacccgg
gctcaggagcgggtgcgggtcgtgggctccgaggccgtggtccgcgccgcggtcgagcgc
cgggtggtccgcgccagcggcttgcaaggccggctgcgcgcgttggccgaccctccgtcg
gctgagtctggggcggcggacctgcccccactcacaggctga
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