Ornithinimicrobium pratense: FY030_14980
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Entry
FY030_14980 CDS
T06221
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
serw
Ornithinimicrobium pratense
Brite
KEGG Orthology (KO) [BR:
serw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
serw03016
]
FY030_14980 (thpR)
Enzymes [BR:
serw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FY030_14980 (thpR)
Transfer RNA biogenesis [BR:
serw03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FY030_14980 (thpR)
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Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QFG69829
UniProt:
A0A5J6V7K3
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All DBs
Position
complement(3253433..3254026)
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AA seq
197 aa
AA seq
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MRAFVALLPPPEVIDQLTSFLEPRRDALAALDTHPRWRWTRPEHLHLTLAFLPELDEWRE
EELEEEGMRWAARVAPLTLRLAGAGAFPDPGAARVLWAAVREEPEVEEPRLGSWASATRA
LASRVGARVDGTRFSPHVTVARAAGRPGLAGHLLQSLDTLHTDPWIAEEVCLIRSYLGQG
PRGTPRYEVLQTWPVGD
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctttcgtggccctcctgcccccgcccgaggtgatcgaccagctgaccagcttc
ctggagccgcgccgcgacgcactcgcggccctcgacacccatccgcggtggcgctggacg
cgcccggagcacctgcacctcaccctggccttcctgcccgagctggacgagtggcgagag
gaggagctggaggaggagggtatgcggtgggccgctcgcgtggccccgctgaccctgcgc
ctggcgggggcaggcgccttcccggacccgggcgcggccagggtgctgtgggcggctgtg
cgcgaggagccagaggtcgaggagccccgcctcggcagctgggcgtccgcgacgcgcgcc
ctggccagcagggtcggcgcccgcgtggacgggacgcggttcagcccacacgtgaccgtc
gcccgggcagccggtcggccgggcctcgccgggcacctgctgcagtcgctggacacgctg
cataccgacccctggatcgctgaggaggtgtgtctcatccggtcgtacctgggtcagggc
ccccgtggcacccctcgttatgaggtgctgcagacgtggccggtcggggactga
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