Salmonella enterica subsp. arizonae: SARI_01246
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Entry
SARI_01246 CDS
T00627
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ses
Salmonella enterica subsp. arizonae
Brite
KEGG Orthology (KO) [BR:
ses00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ses03032
]
SARI_01246
03400 DNA repair and recombination proteins [BR:
ses03400
]
SARI_01246
Enzymes [BR:
ses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SARI_01246
DNA replication proteins [BR:
ses03032
]
Prokaryotic type
DNA Topoisomerases
SARI_01246
DNA repair and recombination proteins [BR:
ses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SARI_01246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
MetOD1
Motif
Other DBs
NCBI-ProteinID:
ABX21148
UniProt:
A9MQ04
LinkDB
All DBs
Position
1204734..1207331
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADSTSTKTAKKPK
KDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLAEKADHIYLATDLDREGEAIA
WHLREVIGGDDARYSRVVFNEITKNAIRQAFEQPGELNINRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDANTITPSGESLPLQVTH
QNDKPFRPVNREQTLAAVSLLEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYIGDNFGKKYLPDNPNQYASKEN
SQEAHEAIRPSDVSVMAESLKDMEADAQKLYQLIWRQFVACQMTPAQYDSTTLTVGAGEF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDDLTLLELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDQVANHQAEWKAVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLIPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDECKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGIF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYV
AAEKEGKATGWSAFFVDGKWVEGKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctcttgtcatcgttgagtccccggcaaaagccaaaacgatcaacaagtat
ctgggtaatgactacgtggtgaaatccagcgtgggtcatatccgtgatttgccgaccagt
ggctcagcagctaaaaagagcgccgactctacctccaccaaaacggctaaaaagcccaaa
aaggatgaacgtggcgctctcgtcaaccgtatgggggttgacccgtggcacaactgggat
gcgcactatgaagtgctgcctggtaaagagaaggtcgtctctgaactgaaacagttggcg
gaaaaagccgaccacatctatctcgcaaccgatcttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtcattggcggcgatgatgcgcgctacagtcgcgtagtctttaac
gaaataaccaaaaatgccattcgccaggcgtttgaacagccgggcgagctgaacattaat
agggtcaatgcccagcaggcgcgtcgctttatggaccgcgtggtaggctatatggtctcg
ccgttgctgtggaaaaagatcgcccgaggcctgtcggcaggtcgcgttcagtctgtcgcg
gtccgtctggtcgttgagcgcgagcgcgagattaaagcgtttgttccggaagagttttgg
gaaattgacgccaatacgataacgccgtctggcgagtcgctaccgctacaggtgacacat
cagaacgacaagccattccgtccggtaaatcgcgagcagacgcttgccgccgtcagcctg
ctggaaaaagcgcgctatagcgtactggagcgtgaagacaaaccgaccagcagcaagcca
ggcgcgccgtttatcacctcaacgctgcaacaggcggccagcacccggctgggctttggc
gtgaagaaaaccatgatgatggcgcaacgtctgtatgaagcgggctacatcacctacatg
cgtactgattccacaaacctgagtcaggatgcggtcaacatggtgcgcggctacatcggc
gataatttcggcaagaaatacctgcctgataacccgaaccagtacgccagtaaagagaat
tcacaggaagcgcacgaagcgatccgcccttccgatgtttctgtcatggcggagtcgttg
aaagacatggaggcggacgcgcagaagctatatcaactgatctggcgtcagtttgtcgcc
tgtcagatgacgccagcgcaatatgactctactacacttaccgttggtgcgggcgagttc
cgcctgaaagcgcgtgggcgtattttgcgttttgacggctggacgaaagtgatgccggcg
ttgcgtaaaggtgatgaagatcgcacgctacctgccgtgaataaaggcgatgatctgacg
ctacttgaactgacgcctgcgcagcactttaccaaaccgccagcccgttttagcgaggct
tcgctggttaaagagcttgaaaaacgcggtattggccgtccgtccacctatgcgtcgatc
atctcgactattcaggaccgcggctatgtgcgcgttgagaaccgtcgtttctatgcggaa
aaaatgggtgaaatcgttaccgatcggctggaggaaaacttccgcgaattgatgaactac
gattttaccgcgcagatggaagatagcttggatcaggtcgcgaatcatcaggccgagtgg
aaagcggtactggataacttcttcagcgactttactcagcagctcgacaaagccgagaaa
gatccggaagaggggggaatgcgcccaaaccagatggtgctgaccagcatcgactgtcca
acttgcggccgtaaaatgggcattcgtactgccagcacaggagttttcctcggttgctca
ggttatgcgctttcaccgaaagagcgctgtaaaacgaccattaacctgataccggaaaat
gaagttttgaacgtgctggagggcgacgacgccgaaaccaacgccttgcgcgccaagcgt
cgctgtcagaagtgcggtacggcgatggacagctatctgatcgatccgaagcgtaaattg
catgtgtgtggtaataacccgacctgtgacggctacgagattgaagagggcgagttccgc
atcaaagggtatgacggcccgatcgttgagtgtgagaaatgcggttccgaaatgcacctg
aaaatggggcgttttggtaagtacatggcctgtactaacgacgagtgtaaaaatacccgt
aagatcttgcgtaacggcgaagttgcgccgccgaaggaagatcctgtcccgctaccggaa
ttgccgtgtgaaaaatcggacgcgtactttgtgttacgcgacggcgccgcaggaatattt
ctggccgccaatacgttcccgaaatcacgcgaaacgcgtgcgccattagtcgaggagctt
taccggttccgcgatcgcctgccggaaaaactgcgttatctggcggatgcgccgcagcag
gatccggaaggaaataaaaccgtcgttcgctttagccgcaaaacaaaacagcagtacgtt
gcggcggaaaaagaggggaaagcgacgggatggtcagcgttcttcgtcgacggcaagtgg
gttgaaggcaaaaaataa
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