Salmonella enterica subsp. arizonae: SARI_02107
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Entry
SARI_02107 CDS
T00627
Name
(GenBank) hypothetical protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ses
Salmonella enterica subsp. arizonae
Pathway
ses03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ses00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SARI_02107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ses03019
]
SARI_02107
Enzymes [BR:
ses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SARI_02107
Messenger RNA biogenesis [BR:
ses03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SARI_02107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ABX21984
UniProt:
A9MIT1
LinkDB
All DBs
Position
complement(2042431..2043798)
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AA seq
455 aa
AA seq
DB search
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPPK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSLLI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDLRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCIDEHKLLRDI
EKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGGGRGRGQSQGGAGRSQQPRRQD
SGAPKAKSKPRAGEGKPAGDKARPPRRPRRITPAQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggattaaaccctgatatcctgcgtgccattgccgagcagggt
taccgtgaacctacccctattcagcagcaggcgattcccgccgtgctggaaggccgcgat
ctgatggccagcgcccagaccggaaccggtaaaacggcgggttttaccctgccattgttg
cagcatctgattacccatcagccgcacgctaaaggtcgtcgcccggtgcgcgcgttgatc
ctcacgccaacccgcgagctggcggcgcaaattggcgaaaacgtcagagattacagtaaa
tatctcaacattcgctcgttggtggtgtttggcggcgtaagcatcaatccgcagatgatg
aaactgcgcggcggcgtggatgtgctggtggcgacgccgggacgtctgctggatctggaa
catcagaatgcggtgaagctggatcagattgaaatcctcgtgctggacgaagccgaccgg
atgctggatatgggcttcattcacgacattcgtcgcgtgctggcaaaactgccgccaaaa
cgccagaatctgctgttctccgctactttctcggacgacatcaaagcgctcgccgaaaag
ctgctgcataacccgctggaaattgaagtggcgcgccgtaacacggcgtcagaacaggtg
acgcaacacgtacactttgtggataaaaaacgcaaacgcgagcttctgtcgctgctgatt
ggccagggtaactggcagcaggtgttggtcttcacccgcaccaagcatggcgcgaaccat
ctggcggaacagcttaataaagacggtattcgcagcgcagcgatccacggtaataaatcg
cagggcgcacgtacccgcgcgctggcggattttaaatccggcgatctccgcgtattggta
gcgacagatattgcggcgcgaggtctggatattgaagaactgccgcatgtggtcaactat
gaactgccgaacgtgccggaagattatgtacaccgtattggccgtaccgggcgtgcagcg
gcaactggcgaggcgctgtcgctggtctgtattgacgagcacaagttgttgcgcgatatc
gaaaagttgctgaaaaaagagataccgcgcattactacgccgggctatgagccggacccg
tcgattaaagcggagccgattcagaatggccgtcagcagcgcggcggcggcggtggcggt
cgtggacgcggtcaaagtcaaggcggagcggggcgcagtcagcagccgcgacgtcaggat
agcggggcgccgaaggcgaaatcaaaaccgcgcgcaggcgaggggaaacccgctggcgac
aaagcgcgtccgccgcgtcgcccgcgcagaatcacgcccgcccagtaa
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