Salmonella enterica subsp. arizonae: SARI_03699
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Entry
SARI_03699 CDS
T00627
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ses
Salmonella enterica subsp. arizonae
Pathway
ses03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ses00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SARI_03699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ses03019
]
SARI_03699
03400 DNA repair and recombination proteins [BR:
ses03400
]
SARI_03699
Enzymes [BR:
ses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SARI_03699
Messenger RNA biogenesis [BR:
ses03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SARI_03699
DNA repair and recombination proteins [BR:
ses03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SARI_03699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ABX23504
UniProt:
A9MIZ5
LinkDB
All DBs
Position
complement(3631135..3632982)
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AA seq
615 aa
AA seq
DB search
MVNGVNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKS
LCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMTGCRTG
QIRLLYIAPERLMLDNFLDHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPA
LPFMALTATADDTTRLDIIRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQ
RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLENAIRADVQEKFQRDDLQIVVATV
AFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEE
KPAGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLN
DAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDFGHDKLKVYGMGREKSHEHWVSVIR
QLIHLGLVMQNIAQHSALQLTDAARPVLRGDVPLKLAVPRIVALKPRVMQKSFGGNYDRK
LFAKLRKLRKAIADEENIPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMRKLERFGKE
FMALIRAHVDGDDGE
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacggggttaatgtggcgcaggcggaagtgttgaatctggaatcaggggccaaa
caggttttgcaggaaacctttggctaccaacagtttcgcccaggccaggaagcgattatt
gatactgcgctctccgggcgcgactgtctggtcgtcatgcccactggcggcggcaaatcc
ctgtgctatcaaatccccgccctgttgctggacggtttgaccgtcgtcgtttcgccgttg
atctcgttgatgaaagaccaggtcgatcagctactggcgaacggcgtggcggcggcgtgt
ctgaactccacccaaagccgcgagcagcagcttgaggtaatgacaggatgccgtaccgga
cagattcgtctgctgtacattgcgccggaacgcctgatgctggacaactttctcgatcat
ctggcgcactggaatccggtattattagcggtggatgaagcgcactgtatctcgcagtgg
ggacatgatttccgtccggaatatgcggctctcggccagcttcgccagcgctttcccgct
ttgccgtttatggcattgaccgccaccgccgacgacaccacgcgtctggatattattcgt
ctgcttggtcttaacgatccgttaattcagatcagtagctttgaccgaccgaatatccgc
tacatgctgatggagaagtttaagccgctcgaccagctaatgcgctatgttcaggagcaa
cgcggcaagtcgggtatcatctactgtaacagccgggcgaaagtggaagataccgctgcg
cgcttgcaaagccgtggcattagcgcggcggcctatcatgcgggactggaaaacgctatt
cgcgctgatgtgcaggaaaaatttcagcgcgacgatctgcaaatcgtggtggcgactgtc
gctttcgggatgggcattaataaacctaacgttcgtttcgtggtgcatttcgatatcccg
cgcaatattgaatcctactatcaggaaacgggccgcgccgggcgtgacggactgcctgcg
gaagccatgctattttacgatccggcggatatggcctggctacgtcgttgtctggaagag
aaacctgccgggcaacttcaggatattgaacggcataaactgaatgcgatgggtgccttc
gccgaagcgcaaacctgccgccgcctggtattgcttaattactttggcgaaggccgacaa
gaaccgtgcggcaattgcgatatttgtctcgatccgcccaaacaatatgacggtttaaac
gatgcccagattgcgctttctaccattggtcgggttaaccagcgttttggcatgggctat
gtcgtcgaggtgattcgaggcgcgaataaccagcgcatccgcgatttcggtcatgacaaa
ctcaaggtttatggcatgggccgcgaaaagagccatgagcactgggtgagcgtgattcgc
cagcttattcatctggggctggtaatgcaaaatattgcgcagcactccgcattacagttg
acggatgccgcgcggccggtactccgtggagacgttccgctgaagcttgctgtgccgcgc
atcgtcgcccttaaaccccgcgtaatgcagaaatcgttcggcggtaattacgatcgcaaa
ttgttcgctaagttgcgcaaactgcgtaaagctatcgctgatgaagagaatatcccgcca
tatgtggtctttaacgacgccacgctaatagagatggcggaacagatgccgattaccgcc
agtgagatgctgagcgttaacggggttgggatgcgcaaactggagcgcttcggcaaagaa
ttcatggcgctcatccgcgcgcatgtcgatggtgatgacggagagtag
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