Salmonella enterica subsp. arizonae: SARI_04342
Help
Entry
SARI_04342 CDS
T00627
Name
(GenBank) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
ses
Salmonella enterica subsp. arizonae
Pathway
ses03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ses00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SARI_04342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ses03019
]
SARI_04342
03016 Transfer RNA biogenesis [BR:
ses03016
]
SARI_04342
Enzymes [BR:
ses01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SARI_04342
Messenger RNA biogenesis [BR:
ses03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SARI_04342
Transfer RNA biogenesis [BR:
ses03016
]
Prokaryotic type
tRNA degradation factors
SARI_04342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
aRib
KH_2
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
ABX24121
UniProt:
A9MP39
LinkDB
All DBs
Position
4263058..4265223
Genome browser
AA seq
721 aa
AA seq
DB search
MPSKIGKDIILLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKA
KPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNE
VQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDEL
KESKLDLVVAGTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPR
WDWQPEAVNDALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIDQLTAEDDTLDA
NELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQA
LVTATLGTARDAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRG
VLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVK
EGDNYVVLSDILGDEDHLGDMDFKVAGSREGISALQMDIKIEGITKEIMQVALNQAKGAR
LHILGVMEQAINAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIE
DDGTVKIAATDGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVH
ISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTQPAAAPEAPTSEQG
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtcaaaaattggaaaggatattattttgcttaatccgatcgttcgtaaattccag
tacggtcagcataccgttacgctggaaactggcatgatggcgcgtcaggccactgctgcc
gttatggtaagcatggatgacaccgccgtattcgttaccgttgtcggtcagaaaaaagcc
aaaccaggccaggacttcttcccgctgactgttaactatcaggagcgtacctacgctgcc
ggtcgtatcccgggtagctttttccgtcgtgaaggtcgcccaagcgaaggcgaaacgctg
atcgcgcgtctgattgaccgcccggttcggccgctgttccctgaaggcttcgtcaacgaa
gttcaggttatcgccaccgtcgtttccgttaacccgcaggttaacccggatatcgtggcg
atgattggtgcttccgccgcgctgtccctgtccggcattccgttcaacggcccgattggc
gctgcgcgcgttggttatattaatgaccagtacgtactgaacccaacccaggacgagcta
aaagagagcaaactggacctggtggttgccggtactgaagcagctgtgctgatggtggaa
tccgaagctgaactgctgagcgaagacactatgctgggcgcagtggtattcggtcacgag
cagcagcaggtggttatccaggcgatcaatgacctggtgaaagaagccggtaaaccgcgt
tgggactggcagccggaagcggttaacgacgcgctgaacgcgcgcgtagctgcgcttgct
gaatctcgtcttagcgacgcttatcgcatcaccgacaaacaagagcgttatgctcaggtt
gacgtgatcaaatctgaaaccatcgatcagcttaccgcagaagacgacactctggacgct
aacgagctgggcgaaatcctgcacgcgatcgagaaaaacgttgttcgtagccgcgtgctg
gcaggcgagccgcgtatcgatggccgtgaaaaagacatgattcgtggtttggatgtccgt
actggcgtactgccgcgtactcatggttccgcgctgttcacccgtggtgaaacgcaggcg
ctggttaccgcaacgctgggtactgctcgtgacgcgcaggtgcttgatgaactgatgggc
gagcgcactgacagcttcctgttccactacaacttccctccgtactccgtaggcgaaacc
ggcatggtcggttctcctaagcgtcgtgaaattggtcacggtcgtctggcgaagcgcggc
gtattggcagtgatgccggacatggataaattcccgtacaccgttcgcgtggtgtctgaa
attacggaatccaacggttcttcctctatggcttccgtgtgcggcgcttccctggcgctg
atggatgctggcgtgccaattaaagccgccgtagcaggtatcgcgatgggtctggtgaaa
gaaggcgacaactacgttgtgctgtctgacattctgggcgacgaagatcacctaggcgat
atggacttcaaagtcgcgggttcccgcgagggtatctctgcgctgcagatggatatcaaa
attgaaggtatcaccaaagagatcatgcaggttgctctgaatcaggcgaaaggcgcccgt
ctgcacatcctgggcgtgatggaacaggcgatcaacgcgccgcgcggcgatatctctgaa
ttcgcgccgcgtatccataccatcaaaatcagcacggacaagatcaaagacgttatcggt
aaaggcggttctgtgatccgcgcgttgactgaagagaccggcaccaccatcgaaatagaa
gatgacggtactgtgaagatcgcggcgaccgacggtgaaaaagcgaagtacgctatccgt
cgtatcgaagagatcaccgctgaaatcgaagtcggtcgtatctacaatggtaaagtgacc
cgcatcgttgactttggcgcgtttgttgccattggcggcggtaaagaaggtctggttcat
atctctcaaattgcggataagcgcgtagagaaagtgaccgactatctgcagatgggtcag
gaagtcccggttaaagttctggaagttgaccgccagggccgtgtacgtctgagcattaaa
gaagcaaccgaacagactcaacctgcggctgcgccggaagcgccgacgagcgaacagggc
gagtaa
DBGET
integrated database retrieval system
