Salmonella enterica subsp. arizonae: SARI_04344
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Entry
SARI_04344 CDS
T00627
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
ses
Salmonella enterica subsp. arizonae
Pathway
ses03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ses00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SARI_04344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ses03019
]
SARI_04344
03009 Ribosome biogenesis [BR:
ses03009
]
SARI_04344
Enzymes [BR:
ses01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SARI_04344
Messenger RNA biogenesis [BR:
ses03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SARI_04344
Ribosome biogenesis [BR:
ses03009
]
Prokaryotic type
rRNA helicases
SARI_04344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
ABX24123
UniProt:
A9MP41
LinkDB
All DBs
Position
4266345..4268294
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AA seq
649 aa
AA seq
DB search
MMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGG
RDVLGMAQTGSGKTAAFSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRG
VNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR
MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQS
YWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQAL
REQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAG
RALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQY
RALLAKIKPSAEGEELDLETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRGPRDR
GPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFA
SHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRSFGGERREGG
RNFSGERREGGRGDGRRFSGERRFSGERRESRGPRRDDSTGRRRFGGDA
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttatgtagactggccgccattaattttgaggcacacgtactacatggctgaa
ttcgaaaccacttttgcagatctggggctgaaggctcctatccttgaagcccttaacgat
ctgggttacgaaaaaccatctccaatccaggcagagtgcattccgcacctgctgggcggt
cgcgacgtgctgggcatggcccagaccggtagcggcaaaactgcagcgttctctttaccg
ctgctcaacaatcttgatcctgagctgaaggcgcctcagattctggtgctggcgccaacc
cgagaactggcggtacaggttgccgaagccatgacggatttctctaaacacatgcgcggc
gtaaacgtggttgccctgtacggcggtcagcgttatgacgtgcagttacgtgccctgcgt
cagggaccgcagatcgtcgttggtacgccaggacgtctgctggaccacctgaaacgcggt
acgctggatctctctaaactgagcggtctggtgctggatgaagccgatgaaatgttacgt
atgggcttcatcgaagacgttgaaactattatggcgcagattccggaaggtcatcagacc
gcgctgttctccgccaccatgccggaagcgattcgtcgcattacccgccgctttatgaaa
gagccgcaggaagtgcgcattcagtccagcgtgactacccgtcctgatattagccagagc
tactggacggtgtgggggatgcgtaaaaacgaagcgctggtgcgtttcctggaagcggaa
gactttgatgcggcgattatcttcgtgcgtaccaaaaacgcgaccctggaagtcgcggaa
gcgctggagcgtagcggctacaacagcgccgcgttgaatggcgatatgaaccaggcgctg
cgtgagcagactctggaacgcctgaaagacggtcgtctggatatcctgatcgccaccgac
gttgcggcccgtggcctggatgttgagcgcattagcctggtggtgaactatgatatcccg
atggattccgagtcttacgttcaccgtatcggtcgtaccggtcgtgcgggtcgcgcggga
cgcgcgctgctgttcgttgaaaaccgcgagcgtcgcctgctgcgtaacattgaacgcact
atgaagctgaccattccggaagtcgaactgccgaatgcagaactgctgggcaaacgccgt
ctggaaaaattcgctgcgaaagttcagcaacagttggaaagcagcgatctggatcagtac
cgtgcgctgctggcgaaaatcaagccgtctgctgaaggcgaagagctggatctcgaaacg
ctggccgccgcgctgctgaaaatggcgcagggcgagcgtccgctgattctgcctccggat
gcgccgatgcgtcctaagcgtgaattccgcgaccgtgatgaccgtggtccacgcgatcgt
ggtccgcgtggcgatcgtgaagatcgtccgcgtcgtgaacgtcgtgacgttggcgatatg
cagttgtaccgcattgaagtgggccgtgatgacggcgtggaagttcgtcatatcgttggc
gcgatcgctaacgaaggcgacatcagcagccgttacattggtaacattaagctgttcgcg
tctcactccaccattgagctgccgaaaggtatgccgggcgaagtgctgcagcactttacc
cgcacccgcatcctgaacaaaccgatgaacatgcagttgctgggcgatgcgcagccgcac
actggtggtgaacgtcgtggcggtggtcgtagctttggcggcgagcgtcgtgaaggcggt
cgtaattttagcggtgaacgtcgtgaaggtggccgtggtgatggtcgtcgtttcagtggc
gaacgtcgtttcagcggcgaacgtcgtgaaagccgtggtccgcgtcgcgatgactctacc
ggtcgtcgtcgtttcggcggtgatgcgtaa
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