Saccharothrix espanaensis: BN6_03310
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Entry
BN6_03310 CDS
T02404
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sesp
Saccharothrix espanaensis
Brite
KEGG Orthology (KO) [BR:
sesp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sesp03032
]
BN6_03310 (topA)
03400 DNA repair and recombination proteins [BR:
sesp03400
]
BN6_03310 (topA)
Enzymes [BR:
sesp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BN6_03310 (topA)
DNA replication proteins [BR:
sesp03032
]
Prokaryotic type
DNA Topoisomerases
BN6_03310 (topA)
DNA repair and recombination proteins [BR:
sesp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BN6_03310 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
CCH27663
UniProt:
K0JTU7
LinkDB
All DBs
Position
330529..333339
Genome browser
AA seq
936 aa
AA seq
DB search
MRRQRTVHTGGSGHSVRRERDGVAGSTRAKKSSGGSASGNRRLVIVESPAKARKIASYLG
ADFVVESSKGHIRDLPRGAADVPAKYKGQPWARLGVDVDHDFEPLYVVTPDKKATVAELK
ELLKDVDELYLATDGDREGEAIAWHLLDTLKPKVPVRRMVFHEITEPAILAAAANPRDLD
QDLVDAQETRRILDRLYGYEVSPVLWKKVMPKLSAGRVQSVATRIVVERERERMKFVTAS
YWDVSATMDAGEQASPRQFAARLVAVDGQRLATGRDFESTGRLKEGSEVRVLDEAQARAI
ADGLVKADMVVSSVEEKPYTRKPYAPFMTSTLQQEAGRKLRFSADRTMRTAQKLYENGYI
TYMRTDSTTLSETAITAARAQATELYGAQYVSKTPRQYTRKVKNAQEAHEAIRPAGEVFR
TPGQVARELESDEFKMYELIWQRTIASQMSDARGNTTSVRISGTTAAGEGVTFAASGRTI
TFAGFLKAYVETVDSEAGGESDDAESRLPELVKDQALVAAELSADGHSTSPPPRFTEASL
IKTMEELGIGRPSTYASIISTVQDRGYVWKKGSALVPSWVAFAVVGLLERHFGRLVDYDF
TAALEDELDGIAAGRQERTTWLSGFYFGGNVGPESSVGRSGGLKKLVGSSVEQIDAREVN
SIPLFVDLEGRTVVVRVGRYGPYLEREVEGEDGAPTSQRANLPDDLPPDELNRGVAEKLF
ATPQEGRSLGNDPVTGHEIVAKEGRFGPYVTEVLPEPPEGTKKPPKPRTGSLFKTMSLDA
VTLDDALKLLSLPRVVGKDPETGAEITAQNGRYGPYLKKGTDSRSLTSEDQLFTVTLDEA
LKIYAEPKKRGRAAAAPPLKELGNDPVSGKPMVVKEGRFGPYVTDGETNASLRKSDSVEG
LSDERGAELLAEKRAKGPAPKKKAPVRKKAPAKSKS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgacaaaggacagtgcacactggcgggtcgggacacagtgttcggagagagcgg
gacggcgtggctggatcgacacgggcgaagaagagcagcgggggatccgcgagcggcaac
cggcggttggtgatcgtcgagtcgcccgcgaaggcgcggaagatcgcgtcctacctcggt
gccgacttcgtcgtggaatcctccaaggggcacatccgcgacctgccccgcggggcggcg
gacgtgcccgccaagtacaagggacagccgtgggcgcggctgggcgtcgacgtcgaccac
gacttcgagccgctctacgtggtcacgccggacaagaaggcgaccgtcgcggagctcaag
gagctgctcaaggacgtcgacgagctctacctggcgacagacggcgaccgggagggcgag
gcgatcgcctggcacctcctggacaccctcaagcccaaggtgccggtccgccggatggtg
ttccacgagatcaccgagcccgcgatcctggccgccgccgcgaacccccgcgacctcgac
caggacctggtcgacgcgcaggagacccggcgcatcctggaccgcctctacggctacgag
gtcagccccgtgctgtggaagaaggtcatgccgaagctctcggcgggccgggtgcagtcg
gtggcgaccaggatcgtggtcgagcgggaacgcgagcggatgaagttcgtgaccgcgtcg
tactgggacgtctcggcgaccatggacgcgggcgagcaggcgtcgccgcgccagttcgcg
gcacggctggtggccgtcgacggccaacgcctggccacgggccgcgacttcgagtcgacc
ggtcggctcaaggagggctcggaggtccgggtcctggacgaggcgcaggcccgcgcgatc
gcggacggcctggtcaaggcggacatggtggtctcctcggtggaggagaagccgtacacg
cgcaagccgtacgcgccgttcatgacctcgaccctccagcaggaggcgggccgcaagctg
cggttctcggccgaccggaccatgcgcaccgcgcagaagctgtacgagaacggctacatc
acctacatgcgcaccgacagcaccacgctgtccgagaccgcgatcaccgcggcccgtgcg
caggccacggagctctacggcgcgcagtacgtgtcgaagacgccccgccagtacacccgg
aaggtcaagaacgcccaggaggcgcacgaggccatccgcccggccggcgaggtgttccgc
acccccggccaggtggcgcgggagctggagtccgacgagttcaagatgtacgagctgatc
tggcagcgcacgatcgcgtcccagatgtccgacgcgcggggcaacacgaccagcgtccgg
atctccggcacgacggcggcgggcgagggcgtcacgttcgccgcgtccggccgcacgatc
accttcgcgggcttcctgaaggcgtacgtggagacggtcgactcggaggcgggcggcgag
tccgacgacgccgagtcgcggctgcccgagctggtcaaggaccaggcgctggtggcggcc
gagctgtccgccgacggccactcgacgtccccgccgccgcgcttcaccgaggccagcctg
atcaagacgatggaggagctgggcatcggccgcccgtccacctacgcctcgatcatcagc
accgtgcaggaccgcggctacgtgtggaagaagggttccgcgctggtcccgtcctgggtg
gcgttcgccgtggtcggcctgctggagcggcacttcggccggctggtggactacgacttc
accgccgcgctggaggacgagctcgacggcatcgccgccggccggcaggagcgcaccacc
tggctgtccgggttctacttcggcggcaacgtcggcccggagtcgtcggtgggccgttcg
ggtggtctgaagaagctggtcgggtcgagcgtcgagcagatcgacgcccgcgaggtgaac
tcgatcccgctgttcgtcgacctggagggccgcacggtcgtggtccgggtcggccgctac
gggccgtacctggagcgcgaggtcgagggcgaggacggcgcgcccacctcgcagcgcgcg
aacctgcccgacgacctgccgccggacgagctgaaccggggcgtggcggagaagctgttc
gccaccccgcaggagggccgctcgctgggcaacgacccggtcaccgggcacgagatcgtg
gccaaggagggccggttcggcccgtacgtgaccgaggtcctgccggaaccgcccgagggc
accaagaagccgccgaagccgcgcaccgggtcgctgttcaagaccatgtcgctggacgcg
gtcacgctggacgacgcgctcaagctgctctcgctgcccagggtggtcggcaaggacccg
gagaccggcgcggagatcaccgcgcagaacggccgctacgggccctacctcaagaagggc
accgactcgcggtcgctgaccagcgaggaccagctgttcacggtaaccctggacgaggcg
ctcaagatctacgccgagcccaagaagcggggccgggcggccgccgcgccgccgttgaag
gagctgggcaacgacccggtgtccggcaagccgatggtggtcaaggagggccggttcggc
ccgtacgtcaccgacggcgagacgaacgcgtcgctgcgcaagtccgacagcgtcgagggg
ttgagcgacgagcgcggggccgagctgctggccgagaagcgcgccaagggcccggcgccg
aagaagaaggcaccggttcgcaagaaggcacccgccaagtcgaagagctag
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integrated database retrieval system
